Gene: BV1G09160 (Beta vulgaris)

Overview top

Gene Identifier
BV1G09160
Transcript Identifier
BV1G09160.1
Gene Type
Coding gene
Location
Bvchr1.sca001 : 8161922-8169100 : positive

Family

Gene family
HOM03D005068
(41 genes in 27 species)
specific family

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Descriptions

Description (AnnoMine)
Chromo domain-containing protein LHP1
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameBv1_007660_jpud
pidBv1_007660_jpud.t1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006333IEAGenome Projectchromatin assembly or disassembly
GO:0048573IEAGenome Projectphotoperiodism, flowering
GO:0009910IEAGenome Projectnegative regulation of flower development
GO:0016568IEAGenome Projectchromatin modification
GO:0006342IEAGenome Projectchromatin silencing
GO:0030154IEAGenome Projectcell differentiation
GO:0010016IEAGenome Projectshoot system morphogenesis
GO:0006351IEAGenome Projecttranscription, DNA-templated
GO:0010048IEAGenome Projectvernalization response
GO:0009908IEAGenome Projectflower development
GO:0009825IEAGenome Projectmultidimensional cell growth
GO:0045857IEAGenome Projectnegative regulation of molecular function, epigenetic
GO:0048364ISOPLAZA Integrative Orthologyroot developmentAT5G17690
GO:0006325ISOPLAZA Integrative Orthologychromatin organizationAT5G17690
GO:0045814ISOPLAZA Integrative Orthologynegative regulation of gene expression, epigeneticAT5G17690
GO:0009648ISOPLAZA Integrative OrthologyphotoperiodismAT5G17690

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEAGenome ProjectDNA binding
GO:0035064IEAGenome Projectmethylated histone residue binding
GO:0003682IEAGenome Projectchromatin binding
GO:0003935ISOPLAZA Integrative OrthologyGTP cyclohydrolase II activityAT5G17690
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT5G17690

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0000791IEAGenome Projecteuchromatin
GO:0005720IEAGenome Projectnuclear heterochromatin
GO:0005634IEAGenome Projectnucleus
GO:0000785IEAGenome Projectchromatin
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT5G17690

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000953Chromo domain/shadow
IPR008251Chromo shadow domain
IPR016197Chromo domain-like
IPR023780Chromo domain
IPR023779Chromo domain, conserved site

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.