Gene: BV0G71990 (Beta vulgaris)

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Gene Identifier
BV0G71990
Transcript Identifier
BV0G71990.1
Gene Type
Coding gene
Location
0052.scaffold00194 : 117899-128705 : positive

Family

Gene family
HOM03D002780
(65 genes in 31 species)
specific family
Subfamily
ORTHO03D001594
(48 genes in 29 species)
specific family

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Descriptions

Description (AnnoMine)
Regulator of nonsense transcripts UPF3
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameBv_13080_cxps
pidBv_13080_cxps.t1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0000184IEAGenome Projectnuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0009863ISOPLAZA Integrative Orthologysalicylic acid mediated signaling pathwayAT1G33980
GO:0009611ISOPLAZA Integrative Orthologyresponse to woundingAT1G33980
GO:0009867ISOPLAZA Integrative Orthologyjasmonic acid mediated signaling pathwayAT1G33980
GO:0048571ISOPLAZA Integrative Orthologylong-day photoperiodismAT1G33980
GO:0042742ISOPLAZA Integrative Orthologydefense response to bacteriumAT1G33980

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000166IEAGenome Projectnucleotide binding
GO:1901265IEAPLAZA Homologynucleoside phosphate bindingHOM03D002780

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005730ISOPLAZA Integrative OrthologynucleolusAT1G33980

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR005120Regulator of nonsense-mediated decay, UPF3
IPR012677Nucleotide-binding, alpha-beta plait

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.