Gene: BR09G52980 (Brassica rapa)

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Gene Identifier
BR09G52980
Transcript Identifier
BR09G52980.1
Gene Type
Coding gene
Location
A09 : 36147567-36152723 : negative

Family

Gene family
HOM03D001781
(93 genes in 29 species)
specific family
Subfamily
ORTHO03D000723
(69 genes in 27 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
II inositol 1,4,5-trisphosphate 5-phosphatase FRA3
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
protein_idBra032456

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0046856IEAInterProphosphatidylinositol dephosphorylation
GO:0048364ISOPLAZA Integrative Orthologyroot developmentAT1G05630
GO:0009743ISOPLAZA Integrative Orthologyresponse to carbohydrateAT1G05630
GO:0010182ISOPLAZA Integrative Orthologysugar mediated signaling pathwayAT1G05630
GO:0007584ISOPLAZA Integrative Orthologyresponse to nutrientAT1G05630
GO:0010252ISOPLAZA Integrative Orthologyauxin homeostasisAT1G05630
GO:0009637ISOPLAZA Integrative Orthologyresponse to blue lightAT1G05630
GO:0010087ISOPLAZA Integrative Orthologyphloem or xylem histogenesisAT1G05630
GO:0009737ISOPLAZA Integrative Orthologyresponse to abscisic acidAT1G05630
GO:0046855ISOPLAZA Integrative Orthologyinositol phosphate dephosphorylationAT1G05630 AT2G43900 AT2G31830
GO:0009611ISOPLAZA Integrative Orthologyresponse to woundingAT1G05630
GO:0046839IEAPLAZA Homologyphospholipid dephosphorylationHOM03D001781

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0052658ISOPLAZA Integrative Orthologyinositol-1,4,5-trisphosphate 5-phosphatase activityAT1G05630 AT2G43900 AT2G31830
GO:0034485ISOPLAZA Tree-based Orthologyphosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activityAT2G31830
GO:0004439ISOPLAZA Tree-based Orthologyphosphatidylinositol-4,5-bisphosphate 5-phosphatase activityAT2G31830

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISOPLAZA Integrative OrthologynucleusAT1G05630

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR005135Endonuclease/exonuclease/phosphatase
IPR001680WD40 repeat
IPR000300Inositol polyphosphate-related phosphatase
IPR015943WD40/YVTN repeat-like-containing domain

Mapman id Description
3.4.5minor CHO metabolism.myo-inositol.inositol phosphatase
28.1DNA.synthesis/chromatin structure
No SignalP domains detected for this gene.