Gene: BR09G47570 (Brassica rapa)

Overview top

Gene Identifier
BR09G47570
Transcript Identifier
BR09G47570.1
Gene Type
Coding gene
Location
A09 : 33611972-33612478 : negative

Family

Gene family
HOM03D000161
(626 genes in 28 species)
specific family

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Descriptions

Description (AnnoMine)
MADS-box protein AGL61
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
protein_idBra026764

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009559ISOPLAZA Tree-based Orthologyembryo sac central cell differentiationAT2G24840
GO:0009658ISOPLAZA Tree-based Orthologychloroplast organizationAT1G65360
GO:0009960ISOPLAZA Tree-based Orthologyendosperm developmentAT5G60440

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0046983IEAInterProprotein dimerization activity
GO:0003677IEAInterProDNA binding
GO:0005515ISOPLAZA Tree-based Orthologyprotein bindingAT2G24840
GO:0003676IEAPLAZA Homologynucleic acid bindingHOM03D000161
GO:1901363IEAPLAZA Homologyheterocyclic compound bindingHOM03D000161
GO:0097159IEAPLAZA Homologyorganic cyclic compound bindingHOM03D000161

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0043078ISOPLAZA Tree-based Orthologypolar nucleusAT2G24840
GO:0005829ISOPLAZA Tree-based OrthologycytosolAT4G36590
GO:0005634IEAPLAZA HomologynucleusHOM03D000161

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR002100Transcription factor, MADS-box

Mapman id Description
27.3.24RNA.regulation of transcription.MADS box transcription factor family
No SignalP domains detected for this gene.
DatabaseType
PlantTFDBM-type