Gene: BR09G17320 (Brassica rapa)

Overview top

Gene Identifier
BR09G17320
Transcript Identifier
BR09G17320.1
Gene Type
Coding gene
Location
A09 : 11390996-11393387 : negative

Family

Gene family
HOM03D000038
(1668 genes in 31 species)
specific family
Subfamily
ORTHO03D011003
(24 genes in 22 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Floral homeotic protein AGAMOUS
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
protein_idBra037895

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IEAInterProregulation of transcription, DNA-dependent
GO:0080155ISOPLAZA Integrative Orthologyregulation of double fertilization forming a zygote and endospermAT4G09960
GO:0048316ISOPLAZA Integrative Orthologyseed developmentAT4G09960
GO:0048481ISOPLAZA Integrative Orthologyovule developmentAT4G09960
GO:0010468IEAPLAZA Homologyregulation of gene expressionHOM03D000038
GO:0010467IEAPLAZA Homologygene expressionHOM03D000038
GO:0006807IEAPLAZA Homologynitrogen compound metabolic processHOM03D000038
GO:0051252IEAPLAZA Homologyregulation of RNA metabolic processHOM03D000038
GO:0051171IEAPLAZA Homologyregulation of nitrogen compound metabolic processHOM03D000038
GO:0044260IEAPLAZA Homologycellular macromolecule metabolic processHOM03D000038
GO:0019222IEAPLAZA Homologyregulation of metabolic processHOM03D000038
GO:0019219IEAPLAZA Homologyregulation of nucleobase-containing compound metabolic processHOM03D000038
GO:0034641IEAPLAZA Homologycellular nitrogen compound metabolic processHOM03D000038
GO:0034645IEAPLAZA Homologycellular macromolecule biosynthetic processHOM03D000038
GO:0050789IEAPLAZA Homologyregulation of biological processHOM03D000038
GO:0009889IEAPLAZA Homologyregulation of biosynthetic processHOM03D000038
GO:0018130IEAPLAZA Homologyheterocycle biosynthetic processHOM03D000038
GO:0043170IEAPLAZA Homologymacromolecule metabolic processHOM03D000038
GO:0019438IEAPLAZA Homologyaromatic compound biosynthetic processHOM03D000038
GO:0046483IEAPLAZA Homologyheterocycle metabolic processHOM03D000038
GO:0016070IEAPLAZA HomologyRNA metabolic processHOM03D000038
GO:0009987IEAPLAZA Homologycellular processHOM03D000038
GO:0044271IEAPLAZA Homologycellular nitrogen compound biosynthetic processHOM03D000038
GO:0065007IEAPLAZA Homologybiological regulationHOM03D000038
GO:0010556IEAPLAZA Homologyregulation of macromolecule biosynthetic processHOM03D000038
GO:0006139IEAPLAZA Homologynucleobase-containing compound metabolic processHOM03D000038
GO:0032774IEAPLAZA HomologyRNA biosynthetic processHOM03D000038
GO:0006725IEAPLAZA Homologycellular aromatic compound metabolic processHOM03D000038
GO:1901576IEAPLAZA Homologyorganic substance biosynthetic processHOM03D000038
GO:0090304IEAPLAZA Homologynucleic acid metabolic processHOM03D000038
GO:0080090IEAPLAZA Homologyregulation of primary metabolic processHOM03D000038
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03D000038
GO:0044237IEAPLAZA Homologycellular metabolic processHOM03D000038
GO:0044238IEAPLAZA Homologyprimary metabolic processHOM03D000038
GO:0009058IEAPLAZA Homologybiosynthetic processHOM03D000038
GO:0009059IEAPLAZA Homologymacromolecule biosynthetic processHOM03D000038
GO:0060255IEAPLAZA Homologyregulation of macromolecule metabolic processHOM03D000038
GO:0006351IEAPLAZA Homologytranscription, DNA-templatedHOM03D000038
GO:2000112IEAPLAZA Homologyregulation of cellular macromolecule biosynthetic processHOM03D000038
GO:0031323IEAPLAZA Homologyregulation of cellular metabolic processHOM03D000038
GO:0031326IEAPLAZA Homologyregulation of cellular biosynthetic processHOM03D000038
GO:1901360IEAPLAZA Homologyorganic cyclic compound metabolic processHOM03D000038
GO:1901362IEAPLAZA Homologyorganic cyclic compound biosynthetic processHOM03D000038
GO:0034654IEAPLAZA Homologynucleobase-containing compound biosynthetic processHOM03D000038
GO:0050794IEAPLAZA Homologyregulation of cellular processHOM03D000038
GO:0008152IEAPLAZA Homologymetabolic processHOM03D000038
GO:0071704IEAPLAZA Homologyorganic substance metabolic processHOM03D000038
GO:0044249IEAPLAZA Homologycellular biosynthetic processHOM03D000038
GO:0048440ISOPLAZA Integrative Orthologycarpel developmentAT4G09960

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003700IEAInterProsequence-specific DNA binding transcription factor activity
GO:0046983IEAInterProprotein dimerization activity
GO:0003677IEAInterProDNA binding
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT4G09960
GO:0097159IEAPLAZA Homologyorganic cyclic compound bindingHOM03D000038
GO:0003676IEAPLAZA Homologynucleic acid bindingHOM03D000038
GO:0005488IEAPLAZA HomologybindingHOM03D000038
GO:1901363IEAPLAZA Homologyheterocyclic compound bindingHOM03D000038
GO:0001071IEAPLAZA Homologynucleic acid binding transcription factor activityHOM03D000038

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEAInterPronucleus
GO:0043231IEAPLAZA Homologyintracellular membrane-bounded organelleHOM03D000038
GO:0005622IEAPLAZA HomologyintracellularHOM03D000038
GO:0043226IEAPLAZA HomologyorganelleHOM03D000038
GO:0043227IEAPLAZA Homologymembrane-bounded organelleHOM03D000038
GO:0043229IEAPLAZA Homologyintracellular organelleHOM03D000038
GO:0044464IEAPLAZA Homologycell partHOM03D000038
GO:0044424IEAPLAZA Homologyintracellular partHOM03D000038
GO:0005623IEAPLAZA HomologycellHOM03D000038

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR002100Transcription factor, MADS-box
IPR002487Transcription factor, K-box

Mapman id Description
27.3.24RNA.regulation of transcription.MADS box transcription factor family
No SignalP domains detected for this gene.
DatabaseType
PlantTFDBMIKC