Gene: BR09G14290 (Brassica rapa)

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Gene Identifier
BR09G14290
Transcript Identifier
BR09G14290.1
Gene Type
Coding gene
Location
A09 : 8575541-8582283 : positive

Family

Gene family
HOM03D000476
(268 genes in 30 species)
specific family
Subfamily
ORTHO03D004319
(36 genes in 29 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Probable Werner syndrome ATP-dependent helicase homolog 1
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
protein_idBra027115

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006260IEAInterProDNA replication
GO:0006281IEAInterProDNA repair
GO:0006310IEAInterProDNA recombination
GO:0044237IEAInterProcellular metabolic process
GO:0000724ISOPLAZA Tree-based Orthologydouble-strand break repair via homologous recombinationAT1G10930
GO:0000723ISOPLAZA Tree-based Orthologytelomere maintenanceAT1G10930
GO:0071215ISOPLAZA Tree-based Orthologycellular response to abscisic acid stimulusAT1G10930
GO:0070417ISOPLAZA Integrative Orthologycellular response to coldAT1G60930 AT1G10930

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008026IEAInterProATP-dependent helicase activity
GO:0043140IEAInterProATP-dependent 3'-5' DNA helicase activity
GO:0000166IEAInterPronucleotide binding
GO:0004386IEAInterProhelicase activity
GO:0003824IEAInterProcatalytic activity
GO:0003676IEAInterPronucleic acid binding
GO:0005524IEAInterProATP binding
GO:0043138ISOPLAZA Tree-based Orthology3'-5' DNA helicase activityAT1G10930
GO:0042623IEAPLAZA HomologyATPase activity, coupledHOM03D000476
GO:0016887IEAPLAZA HomologyATPase activityHOM03D000476
GO:0070035IEAPLAZA Homologypurine NTP-dependent helicase activityHOM03D000476

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005622IEAInterProintracellular
GO:0009506ISOPLAZA Tree-based OrthologyplasmodesmaAT1G10930

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR014001Helicase, superfamily 1/2, ATP-binding domain
IPR018982RQC domain
IPR010997HRDC-like
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR002121HRDC domain
IPR011545DNA/RNA helicase, DEAD/DEAH box type, N-terminal
IPR001650Helicase, C-terminal
IPR002464DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site
IPR004589DNA helicase, ATP-dependent, RecQ type
IPR011991Winged helix-turn-helix DNA-binding domain

Mapman id Description
28.1DNA.synthesis/chromatin structure
No SignalP domains detected for this gene.