PLAZA 3.0 Dicots gene overview : BR09G09880

Gene: BR09G09880 (Brassica rapa)

Overview

Gene Identifier: BR09G09880
Transcript Identifier: BR09G09880.1
Gene Type: Coding gene
Location: A09 : 5199784-5200887 : negative

Family

Gene family: HOM03D000741
(188 genes in 31 species)
specific family
Subfamily: ORTHO03D059089
(2 genes in 2 species)
specific family
Duplication type: Block duplicate

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Descriptions

Description (AnnoMine): Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplastic

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
protein_id	Bra038544

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0008299	IEA	InterPro	isoprenoid biosynthetic process
GO:0008610	IEA	PLAZA Homology	lipid biosynthetic process	HOM03D000741
GO:0006720	IEA	PLAZA Homology	isoprenoid metabolic process	HOM03D000741
GO:0044255	IEA	PLAZA Homology	cellular lipid metabolic process	HOM03D000741

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0004311	ISO	PLAZA Integrative Orthology	farnesyltranstransferase activity	AT2G18640

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005783	ISO	PLAZA Integrative Orthology	endoplasmic reticulum	AT2G18640

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR008949	Terpenoid synthase
IPR000092	Polyprenyl synthetase
IPR017446	Polyprenyl synthetase-related

Mapman id	Description
16.1.1.10	secondary metabolism.isoprenoids.non-mevalonate pathway.geranylgeranyl pyrophosphate synthase

SignalP	Description
SignalP-noTM	Signal Peptide detected using noTM network