PLAZA 3.0 Dicots gene overview : BR08G30890

Gene: BR08G30890 (Brassica rapa)

Overview

Gene Identifier: BR08G30890
Transcript Identifier: BR08G30890.1
Gene Type: Coding gene
Location: A08 : 21067727-21069790 : negative

Family

Gene family: HOM03D001846
(91 genes in 30 species)
specific family
Subfamily: ORTHO03D005667
(33 genes in 28 species)
specific family
Duplication type: Block duplicate

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Descriptions

Description (AnnoMine): Probable uridine nucleosidase 2

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
protein_id	Bra030616

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0010150	ISO	PLAZA Tree-based Orthology	leaf senescence	AT1G05620
GO:0006148	ISO	PLAZA Tree-based Orthology	inosine catabolic process	AT1G05620

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0047724	ISO	PLAZA Tree-based Orthology	inosine nucleosidase activity	AT1G05620
GO:0035251	ISO	PLAZA Tree-based Orthology	UDP-glucosyltransferase activity	AT1G05620
GO:0045437	IEA	PLAZA Homology	uridine nucleosidase activity	HOM03D001846
GO:0050263	IEA	PLAZA Homology	ribosylpyrimidine nucleosidase activity	HOM03D001846

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005829	ISO	PLAZA Tree-based Orthology	cytosol	AT1G05620

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR001910	Inosine/uridine-preferring nucleoside hydrolase domain
IPR023186	Inosine/uridine-preferring nucleoside hydrolase

Mapman id	Description
23.2.1.2	nucleotide metabolism.degradation.pyrimidine.uridine nucleosidase

No SignalP domains detected for this gene.