Gene: BR08G22240 (Brassica rapa)

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Gene Identifier
BR08G22240
Transcript Identifier
BR08G22240.1
Gene Type
Coding gene
Location
A08 : 17163332-17164192 : negative

Family

Gene family
HOM03D001047
(143 genes in 31 species)
specific family
Subfamily
ORTHO03D033360
(4 genes in 4 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
U2af small subunit A
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
protein_idBra010926

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0048573ISOPLAZA Integrative Orthologyphotoperiodism, floweringAT1G27650

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000166IEAInterPronucleotide binding
GO:0003723IEAInterProRNA binding
GO:0003676IEAInterPronucleic acid binding
GO:0046872IEAInterPrometal ion binding
GO:1901265IEAPLAZA Homologynucleoside phosphate bindingHOM03D001047

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEAInterPronucleus

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000504RNA recognition motif domain
IPR009145U2 auxiliary factor small subunit
IPR000571Zinc finger, CCCH-type
IPR012677Nucleotide-binding, alpha-beta plait
IPR003954RNA recognition motif domain, eukaryote

Mapman id Description
27.1.1RNA.processing.splicing
No SignalP domains detected for this gene.