Gene: BR06G38200 (Brassica rapa)

Overview top

Gene Identifier
BR06G38200
Transcript Identifier
BR06G38200.1
Gene Type
Coding gene
Location
A06 : 25379741-25381327 : positive

Family

Gene family
HOM03D004760
(42 genes in 31 species)
specific family
Subfamily
ORTHO03D005378
(34 genes in 31 species)
specific family

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Descriptions

Description (AnnoMine)
cap-binding protein subunit 2
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
protein_idBra033729

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0045292IEAInterPromRNA cis splicing, via spliceosome
GO:0031053ISOPLAZA Integrative Orthologyprimary miRNA processingAT5G44200
GO:0000394ISOPLAZA Integrative OrthologyRNA splicing, via endonucleolytic cleavage and ligationAT5G44200
GO:0016070ISOPLAZA Integrative OrthologyRNA metabolic processAT5G44200

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000339IEAInterProRNA cap binding
GO:0000166IEAInterPronucleotide binding
GO:0003676IEAInterPronucleic acid binding
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT5G44200
GO:1901265IEAPLAZA Homologynucleoside phosphate bindingHOM03D004760

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005846IEAInterPronuclear cap binding complex
GO:0005845ISOPLAZA Integrative OrthologymRNA cap binding complexAT5G44200

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000504RNA recognition motif domain
IPR027157Nuclear cap-binding protein subunit 2
IPR012677Nucleotide-binding, alpha-beta plait

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.