Gene: BR06G11980 (Brassica rapa)

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Gene Identifier
BR06G11980
Transcript Identifier
BR06G11980.1
Gene Type
Coding gene
Location
A06 : 6479595-6481377 : negative

Family

Gene family
HOM03D000071
(1215 genes in 31 species)
specific family
Subfamily
ORTHO03D002116
(44 genes in 28 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Putative ubiquitin-conjugating enzyme E2 N-like
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
protein_idBra026018

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010053ISOPLAZA Integrative Orthologyroot epidermal cell differentiationAT1G78870
GO:0010039ISOPLAZA Integrative Orthologyresponse to iron ionAT1G78870
GO:0006301ISOPLAZA Integrative Orthologypostreplication repairAT1G78870
GO:0006511ISOPLAZA Integrative Orthologyubiquitin-dependent protein catabolic processAT1G78870
GO:0046686ISOPLAZA Integrative Orthologyresponse to cadmium ionAT1G78870

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016881IEAInterProacid-amino acid ligase activity
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT1G78870
GO:0004842ISOPLAZA Integrative Orthologyubiquitin-protein ligase activityAT1G78870
GO:0016874IEAPLAZA Homologyligase activityHOM03D000071
GO:0016879IEAPLAZA Homologyligase activity, forming carbon-nitrogen bondsHOM03D000071
GO:0003824IEAPLAZA Homologycatalytic activityHOM03D000071

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0031372ISOPLAZA Integrative OrthologyUBC13-MMS2 complexAT1G78870

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR023313Ubiquitin-conjugating enzyme, active site
IPR000608Ubiquitin-conjugating enzyme, E2
IPR016135Ubiquitin-conjugating enzyme/RWD-like

Mapman id Description
29.5.11.3protein.degradation.ubiquitin.E2
No SignalP domains detected for this gene.