Gene: BR03G49700 (Brassica rapa)

Overview top

Gene Identifier
BR03G49700
Transcript Identifier
BR03G49700.1
Gene Type
Coding gene
Location
A03 : 26565175-26565876 : positive

Family

Gene family
HOM03D000386
(323 genes in 31 species)
specific family
Subfamily
ORTHO03D011591
(22 genes in 16 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
protein ligase RMA3
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
protein_idBra019048

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0032940ISOPLAZA Tree-based Orthologysecretion by cellAT4G03510
GO:0032527ISOPLAZA Tree-based Orthologyprotein exit from endoplasmic reticulumAT4G03510
GO:0006511ISOPLAZA Tree-based Orthologyubiquitin-dependent protein catabolic processAT4G03510

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0008270IEAInterProzinc ion binding
GO:0004842ISOPLAZA Tree-based Orthologyubiquitin-protein ligase activityAT4G28270 AT4G03510 AT4G27470
GO:0046914IEAPLAZA Homologytransition metal ion bindingHOM03D000386

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020ISOPLAZA Tree-based OrthologymembraneAT4G03510
GO:0005783ISOPLAZA Tree-based Orthologyendoplasmic reticulumAT4G28270 AT4G03510 AT4G27470

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001841Zinc finger, RING-type
IPR017907Zinc finger, RING-type, conserved site
IPR013083Zinc finger, RING/FYVE/PHD-type

Mapman id Description
29.5.11.4.2protein.degradation.ubiquitin.E3.RING
No SignalP domains detected for this gene.