Gene: BR03G39090 (Brassica rapa)

Overview top

Gene Identifier
BR03G39090
Transcript Identifier
BR03G39090.1
Gene Type
Coding gene
Location
A03 : 20204877-20210554 : negative

Family

Gene family
HOM03D004167
(46 genes in 31 species)
specific family
Subfamily
ORTHO03D004335
(36 genes in 30 species)
specific family
Duplication type
Block duplicate

Loading...please wait

Descriptions

Description (AnnoMine)
cap-binding protein subunit 1
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
protein_idBra013145

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0016070IEAInterProRNA metabolic process
GO:0045292IEAInterPromRNA cis splicing, via spliceosome
GO:0051028IEAInterPromRNA transport
GO:0031053ISOPLAZA Integrative Orthologyprimary miRNA processingAT2G13540
GO:0000394ISOPLAZA Integrative OrthologyRNA splicing, via endonucleolytic cleavage and ligationAT2G13540
GO:0048574ISOPLAZA Integrative Orthologylong-day photoperiodism, floweringAT2G13540
GO:0009737ISOPLAZA Integrative Orthologyresponse to abscisic acidAT2G13540

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0000339IEAInterProRNA cap binding
GO:0005488IEAInterProbinding
GO:0003723IEAInterProRNA binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005846IEAInterPronuclear cap binding complex
GO:0005634ISOPLAZA Integrative OrthologynucleusAT2G13540

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR027159Nuclear cap-binding protein subunit 1
IPR003890MIF4G-like, type 3
IPR016024Armadillo-type fold
IPR016021MIF4-like, type 1/2/3
IPR015174MIF4G-like, type 2
IPR015172MIF4G-like, type 1

Mapman id Description
29.2.3protein.synthesis.initiation
No SignalP domains detected for this gene.