PLAZA 3.0 Dicots gene overview : BR02G27770

Gene: BR02G27770 (Brassica rapa)

Overview

Gene Identifier: BR02G27770
Transcript Identifier: BR02G27770.1
Gene Type: Coding gene
Location: A02 : 17758466-17760383 : positive

Family

Gene family: HOM03D001221
(126 genes in 29 species)
specific family
Subfamily: ORTHO03D000611
(75 genes in 29 species)
specific family
Duplication type: Block duplicate

Loading...please wait

Descriptions

Description (AnnoMine): Regulatory protein NPR4

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
protein_id	Bra021949

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0080185	ISO	PLAZA Integrative Orthology	effector dependent induction by symbiont of host immune response	AT5G45110 AT4G19660
GO:0009817	ISO	PLAZA Integrative Orthology	defense response to fungus, incompatible interaction	AT5G45110 AT4G19660
GO:0009627	ISO	PLAZA Integrative Orthology	systemic acquired resistance	AT5G45110 AT4G19660
GO:0009816	ISO	PLAZA Integrative Orthology	defense response to bacterium, incompatible interaction	AT5G45110 AT4G19660
GO:2000031	ISO	PLAZA Tree-based Orthology	regulation of salicylic acid mediated signaling pathway	AT4G19660
GO:2000022	ISO	PLAZA Tree-based Orthology	regulation of jasmonic acid mediated signaling pathway	AT4G19660

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0005515	IEA	InterPro	protein binding
GO:1901149	ISO	PLAZA Integrative Orthology	salicylic acid binding	AT5G45110 AT4G19660

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005634	ISO	PLAZA Tree-based Orthology	nucleus	AT4G19660

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR020683	Ankyrin repeat-containing domain
IPR021094	NPR1/NIM1-like, C-terminal
IPR002110	Ankyrin repeat
IPR024228	Domain of unknown function DUF3420
IPR011333	BTB/POZ fold
IPR000210	BTB/POZ-like
IPR013069	BTB/POZ

Mapman id	Description
31.1	cell.organisation

No SignalP domains detected for this gene.