Gene: BR02G16330 (Brassica rapa)

Overview top

Gene Identifier
BR02G16330
Transcript Identifier
BR02G16330.1
Gene Type
Coding gene
Location
A02 : 8631376-8634296 : negative

Family

Gene family
HOM03D001396
(113 genes in 31 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Proline--tRNA ligase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
protein_idBra022597

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006433IEAInterProprolyl-tRNA aminoacylation
GO:0006418IEAInterProtRNA aminoacylation for protein translation
GO:0048481ISOPLAZA Integrative Orthologyovule developmentAT5G52520
GO:0009553ISOPLAZA Integrative Orthologyembryo sac developmentAT5G52520
GO:0010109ISOPLAZA Integrative Orthologyregulation of photosynthesisAT5G52520
GO:0048316ISOPLAZA Integrative Orthologyseed developmentAT5G52520

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000166IEAInterPronucleotide binding
GO:0004827IEAInterProproline-tRNA ligase activity
GO:0005524IEAInterProATP binding
GO:0004812IEAInterProaminoacyl-tRNA ligase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737IEAInterProcytoplasm
GO:0009570ISOPLAZA Integrative Orthologychloroplast stromaAT5G52520
GO:0005739ISOPLAZA Integrative OrthologymitochondrionAT5G52520
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT5G52520

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR016061Proline-tRNA ligase, class II, C-terminal
IPR004499Proline-tRNA ligase, class IIa, archaeal-type
IPR004154Anticodon-binding
IPR017449Prolyl-tRNA synthetase, class II
IPR002316Proline-tRNA ligase, class IIa
IPR002314Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain
IPR006195Aminoacyl-tRNA synthetase, class II

Mapman id Description
29.1.40protein.aa activation.bifunctional aminoacyl-tRNA synthetase
No SignalP domains detected for this gene.