Gene: BR02G07470 (Brassica rapa)

Overview top

Gene Identifier
BR02G07470
Transcript Identifier
BR02G07470.1
Gene Type
Coding gene
Location
A02 : 3752102-3754325 : negative

Family

Gene family
HOM03D000936
(156 genes in 31 species)
specific family
Subfamily
ORTHO03D000313
(103 genes in 29 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
glucose 6-dehydrogenase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
protein_idBra023520

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0055114IEAInterProoxidation-reduction process
GO:0005975ISOPLAZA Integrative Orthologycarbohydrate metabolic processAT5G15490
GO:0052546ISOPLAZA Integrative Orthologycell wall pectin metabolic processAT5G15490
GO:0006065ISOPLAZA Integrative OrthologyUDP-glucuronate biosynthetic processAT5G15490

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003979IEAInterProUDP-glucose 6-dehydrogenase activity
GO:0051287IEAInterProNAD binding
GO:0016616IEAInterProoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0016614IEAPLAZA Homologyoxidoreductase activity, acting on CH-OH group of donorsHOM03D000936

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005829ISOPLAZA Integrative OrthologycytosolAT5G15490
GO:0005634ISOPLAZA Integrative OrthologynucleusAT5G15490
GO:0005618ISOPLAZA Integrative Orthologycell wallAT5G15490

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR014027UDP-glucose/GDP-mannose dehydrogenase, C-terminal
IPR017476UDP-glucose/GDP-mannose dehydrogenase
IPR001732UDP-glucose/GDP-mannose dehydrogenase, N-terminal
IPR016040NAD(P)-binding domain
IPR014026UDP-glucose/GDP-mannose dehydrogenase, dimerisation
IPR028356UDP-glucose 6-dehydrogenase, eukaryotic type
IPR0089276-phosphogluconate dehydrogenase, C-terminal-like

Mapman id Description
10.1.4cell wall.precursor synthesis.UGD
No SignalP domains detected for this gene.