Gene: BR00G00040 (Brassica rapa)

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Gene Identifier
BR00G00040
Transcript Identifier
BR00G00040.1
Gene Type
Coding gene
Location
Scaffold000164 : 12197-14366 : negative

Family

Gene family
HOM03D001231
(125 genes in 31 species)
specific family
Subfamily
ORTHO03D000776
(67 genes in 31 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Phosphoglycerate kinase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
protein_idBra039342

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006096IEAInterProglycolysis
GO:0046686ISOPLAZA Integrative Orthologyresponse to cadmium ionAT3G12780 AT1G56190
GO:0009409ISOPLAZA Integrative Orthologyresponse to coldAT3G12780

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004618IEAInterProphosphoglycerate kinase activity
GO:0016774IEAPLAZA Homologyphosphotransferase activity, carboxyl group as acceptorHOM03D001231

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005829ISOPLAZA Integrative OrthologycytosolAT3G12780
GO:0016020ISOPLAZA Integrative OrthologymembraneAT3G12780 AT1G56190
GO:0048046ISOPLAZA Integrative OrthologyapoplastAT3G12780
GO:0010319ISOPLAZA Integrative OrthologystromuleAT3G12780
GO:0009579ISOPLAZA Integrative OrthologythylakoidAT3G12780 AT1G56190
GO:0005618ISOPLAZA Integrative Orthologycell wallAT3G12780
GO:0005737ISOPLAZA Integrative OrthologycytoplasmAT3G12780
GO:0009570ISOPLAZA Integrative Orthologychloroplast stromaAT3G12780 AT1G56190
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT3G12780 AT1G56190
GO:0005739ISOPLAZA Integrative OrthologymitochondrionAT3G12780 AT1G56190
GO:0005634ISOPLAZA Integrative OrthologynucleusAT3G12780
GO:0009941ISOPLAZA Integrative Orthologychloroplast envelopeAT3G12780

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR015824Phosphoglycerate kinase, N-terminal
IPR001576Phosphoglycerate kinase
IPR015911Phosphoglycerate kinase, conserved site
IPR015901Phosphoglycerate kinase, C-terminal

Mapman id Description
1.3.3PS.calvin cycle.phosphoglycerate kinase
No SignalP domains detected for this gene.