Gene: ATR_00209G00040 (Amborella trichopoda)

Overview top

Gene Identifier
ATR_00209G00040
Transcript Identifier
ATR_00209G00040.1
Gene Type
Coding gene
Location
scaffold00209 : 122064-141069 : positive

Family

Gene family
HOM03D001051
(143 genes in 31 species)
specific family
Subfamily
ORTHO03D005692
(33 genes in 26 species)
specific family
Duplication type
Tandem duplicate

Loading...please wait

Descriptions

Description (AnnoMine)
Methionine--tRNA ligase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameevm_27.TU.AmTr_v1.0_scaffold00209.4
idevm_27.model.AmTr_v1.0_scaffold00209.4

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006431IEAInterPromethionyl-tRNA aminoacylation
GO:0006418IEAInterProtRNA aminoacylation for protein translation
GO:0046686ISOPLAZA Integrative Orthologyresponse to cadmium ionAT4G13780

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000049IEAInterProtRNA binding
GO:0000166IEAInterPronucleotide binding
GO:0004825IEAInterPromethionine-tRNA ligase activity
GO:0005524IEAInterProATP binding
GO:0004812IEAInterProaminoacyl-tRNA ligase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737IEAInterProcytoplasm
GO:0005829ISOPLAZA Integrative OrthologycytosolAT4G13780

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR002547tRNA-binding domain
IPR014758Methionyl-tRNA synthetase
IPR009080Aminoacyl-tRNA synthetase, class 1a, anticodon-binding
IPR015413Methionyl/Leucyl tRNA synthetase
IPR014729Rossmann-like alpha/beta/alpha sandwich fold
IPR012340Nucleic acid-binding, OB-fold
IPR023458Methionine-tRNA ligase, type 1
IPR001412Aminoacyl-tRNA synthetase, class I, conserved site

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.