Gene: ATR_00185G00190 (Amborella trichopoda)

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Gene Identifier
ATR_00185G00190
Transcript Identifier
ATR_00185G00190.1
Gene Type
Coding gene
Location
scaffold00185 : 429945-435945 : negative

Family

Gene family
HOM03D003830
(49 genes in 31 species)
specific family
Subfamily
ORTHO03D004389
(36 genes in 31 species)
specific family
Duplication type
Tandem duplicate

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Descriptions

Description (AnnoMine)
synthase [NAD(P)(+)]-like
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameevm_27.TU.AmTr_v1.0_scaffold00185.19
idevm_27.model.AmTr_v1.0_scaffold00185.19

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0008033IEAInterProtRNA processing
GO:0055114IEAInterProoxidation-reduction process

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0050660IEAInterProflavin adenine dinucleotide binding
GO:0017150IEAInterProtRNA dihydrouridine synthase activity
GO:0003824IEAInterProcatalytic activity
GO:0046872IEAInterPrometal ion binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005773ISOPLAZA Integrative OrthologyvacuoleAT4G38890

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001269tRNA-dihydrouridine synthase
IPR013785Aldolase-type TIM barrel
IPR000571Zinc finger, CCCH-type
IPR018517tRNA-dihydrouridine synthase, conserved site

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.