Gene: ATR_00109G00290 (Amborella trichopoda)

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Gene Identifier
ATR_00109G00290
Transcript Identifier
ATR_00109G00290.1
Gene Type
Coding gene
Location
scaffold00109 : 363010-373238 : positive

Family

Gene family
HOM03D005643
(38 genes in 30 species)
specific family
Subfamily
ORTHO03D006046
(33 genes in 28 species)
specific family
Duplication type
Tandem duplicate

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Descriptions

Description (AnnoMine)
lysidine synthase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameevm_27.TU.AmTr_v1.0_scaffold00109.29
idevm_27.model.AmTr_v1.0_scaffold00109.29

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0008033IEAInterProtRNA processing
GO:0010098ISOPLAZA Integrative Orthologysuspensor developmentAT3G24560
GO:0009793ISOPLAZA Integrative Orthologyembryo development ending in seed dormancyAT3G24560
GO:0009658ISOPLAZA Integrative Orthologychloroplast organizationAT3G24560

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000166IEAInterPronucleotide binding
GO:0016879IEAInterProligase activity, forming carbon-nitrogen bonds
GO:0005524IEAInterProATP binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737IEAInterProcytoplasm

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011063tRNA(Ile)-lysidine/2-thiocytidine synthase
IPR014729Rossmann-like alpha/beta/alpha sandwich fold
IPR012795Lysidine-tRNA(Ile) synthetase, N-terminal
IPR012094Lysidine-tRNA(Ile) synthetase

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.