Gene: ATR_00106G00250 (Amborella trichopoda)

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Gene Identifier
ATR_00106G00250
Transcript Identifier
ATR_00106G00250.1
Gene Type
Coding gene
Location
scaffold00106 : 418402-441004 : negative

Family

Gene family
HOM03D004787
(42 genes in 30 species)
specific family
Subfamily
ORTHO03D008774
(29 genes in 27 species)
specific family
Duplication type
Tandem duplicate

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Descriptions

Description (AnnoMine)
Leucine--tRNA ligase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameevm_27.TU.AmTr_v1.0_scaffold00106.25
idevm_27.model.AmTr_v1.0_scaffold00106.25

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006429IEAInterProleucyl-tRNA aminoacylation
GO:0006418IEAInterProtRNA aminoacylation for protein translation
GO:0009793ISOPLAZA Integrative Orthologyembryo development ending in seed dormancyAT4G04350

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0002161IEAInterProaminoacyl-tRNA editing activity
GO:0000166IEAInterPronucleotide binding
GO:0004823IEAInterProleucine-tRNA ligase activity
GO:0005524IEAInterProATP binding
GO:0004812IEAInterProaminoacyl-tRNA ligase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009570ISOPLAZA Integrative Orthologychloroplast stromaAT4G04350
GO:0005739ISOPLAZA Integrative OrthologymitochondrionAT4G04350
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT4G04350

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR002302Leucine-tRNA ligase, bacterial/mitochondrial
IPR002300Aminoacyl-tRNA synthetase, class Ia
IPR013155Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding
IPR001412Aminoacyl-tRNA synthetase, class I, conserved site
IPR009008Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain
IPR014729Rossmann-like alpha/beta/alpha sandwich fold
IPR009080Aminoacyl-tRNA synthetase, class 1a, anticodon-binding
IPR015413Methionyl/Leucyl tRNA synthetase
IPR025709Leucyl-tRNA synthetase, editing domain

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.