Gene: ATR_00096G00080 (Amborella trichopoda)

Overview top

Gene Identifier
ATR_00096G00080
Transcript Identifier
ATR_00096G00080.1
Gene Type
Coding gene
Location
scaffold00096 : 171243-178111 : negative

Family

Gene family
HOM03D001684
(97 genes in 30 species)
specific family
Subfamily
ORTHO03D000577
(76 genes in 30 species)
specific family
Duplication type
Tandem duplicate

Loading...please wait

Descriptions

Description (AnnoMine)
ATP-citrate synthase subunit alpha chain protein 1
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameevm_27.TU.AmTr_v1.0_scaffold00096.9
idevm_27.model.AmTr_v1.0_scaffold00096.9

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006085ISOPLAZA Integrative Orthologyacetyl-CoA biosynthetic processAT1G60810 AT1G10670
GO:0048366ISOPLAZA Integrative Orthologyleaf developmentAT1G10670
GO:0045793ISOPLAZA Integrative Orthologypositive regulation of cell sizeAT1G10670
GO:0045995ISOPLAZA Integrative Orthologyregulation of embryonic developmentAT1G10670
GO:0043481ISOPLAZA Integrative Orthologyanthocyanin accumulation in tissues in response to UV lightAT1G10670
GO:0019252ISOPLAZA Integrative Orthologystarch biosynthetic processAT1G10670
GO:0015995ISOPLAZA Integrative Orthologychlorophyll biosynthetic processAT1G10670
GO:0016117ISOPLAZA Integrative Orthologycarotenoid biosynthetic processAT1G10670
GO:0010025ISOPLAZA Integrative Orthologywax biosynthetic processAT1G10670
GO:0009911ISOPLAZA Integrative Orthologypositive regulation of flower developmentAT1G10670
GO:0007568ISOPLAZA Integrative OrthologyagingAT1G10670
GO:0006633ISOPLAZA Integrative Orthologyfatty acid biosynthetic processAT1G10670

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005524IEAInterProATP binding
GO:0003878ISOPLAZA Integrative OrthologyATP citrate synthase activityAT1G10670

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009346ISOPLAZA Integrative Orthologycitrate lyase complexAT1G10670
GO:0005829ISOPLAZA Integrative OrthologycytosolAT1G10670

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR013650ATP-grasp fold, succinyl-CoA synthetase-type
IPR016102Succinyl-CoA synthetase-like
IPR013816ATP-grasp fold, subdomain 2

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.