Gene: ATR_00089G00480 (Amborella trichopoda)

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Gene Identifier
ATR_00089G00480
Transcript Identifier
ATR_00089G00480.1
Gene Type
Coding gene
Location
scaffold00089 : 1103567-1126378 : positive

Family

Gene family
HOM03D001316
(118 genes in 31 species)
specific family
Subfamily
ORTHO03D011217
(24 genes in 23 species)
specific family

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Descriptions

Description (AnnoMine)
Lysine--tRNA ligase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameevm_27.TU.AmTr_v1.0_scaffold00089.48
idevm_27.model.AmTr_v1.0_scaffold00089.48

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006430IEAInterProlysyl-tRNA aminoacylation
GO:0006418IEAInterProtRNA aminoacylation for protein translation
GO:0048481ISOPLAZA Integrative Orthologyovule developmentAT3G13490

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000166IEAInterPronucleotide binding
GO:0004824IEAInterProlysine-tRNA ligase activity
GO:0003676IEAInterPronucleic acid binding
GO:0005524IEAInterProATP binding
GO:0004812IEAInterProaminoacyl-tRNA ligase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737IEAInterProcytoplasm
GO:0005739ISOPLAZA Integrative OrthologymitochondrionAT3G13490
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT3G13490

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR018149Lysyl-tRNA synthetase, class II, C-terminal
IPR018150Aminoacyl-tRNA synthetase, class II (D/K/N)-like
IPR004364Aminoacyl-tRNA synthetase, class II (D/K/N)
IPR002313Lysine-tRNA ligase, class II
IPR004365OB-fold nucleic acid binding domain, AA-tRNA synthetase-type
IPR012340Nucleic acid-binding, OB-fold
IPR006195Aminoacyl-tRNA synthetase, class II

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.