Gene: ATR_00088G01090 (Amborella trichopoda)

Overview top

Gene Identifier
ATR_00088G01090
Transcript Identifier
ATR_00088G01090.1
Gene Type
Coding gene
Location
scaffold00088 : 2119924-2120718 : negative

Family

Gene family
HOM03D000162
(626 genes in 29 species)
specific family
Subfamily
ORTHO03D010504
(25 genes in 20 species)
specific family
Duplication type
Block duplicate

Loading...please wait

Descriptions

Description (AnnoMine)
Zinc finger protein 6
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameevm_27.TU.AmTr_v1.0_scaffold00088.111
idevm_27.model.AmTr_v1.0_scaffold00088.111

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009736ISOPLAZA Integrative Orthologycytokinin-activated signaling pathwayAT1G10480
GO:0048510ISOPLAZA Integrative Orthologyregulation of timing of transition from vegetative to reproductive phaseAT1G10480
GO:0009740ISOPLAZA Integrative Orthologygibberellic acid mediated signaling pathwayAT1G10480
GO:0010026ISOPLAZA Integrative Orthologytrichome differentiationAT1G10480
GO:0006355ISOPLAZA Integrative Orthologyregulation of transcription, DNA-dependentAT1G10480

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003676IEAInterPronucleic acid binding
GO:0046872IEAInterPrometal ion binding
GO:0043169IEAPLAZA Homologycation bindingHOM03D000162
GO:0043167IEAPLAZA Homologyion bindingHOM03D000162

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR007087Zinc finger, C2H2
IPR013087Zinc finger C2H2-type/integrase DNA-binding domain

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.