Gene: ATR_00072G01340 (Amborella trichopoda)

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Gene Identifier
ATR_00072G01340
Transcript Identifier
ATR_00072G01340.1
Gene Type
Coding gene
Location
scaffold00072 : 3430897-3490153 : positive

Family

Gene family
HOM03D005150
(40 genes in 30 species)
specific family
Subfamily
ORTHO03D006898
(32 genes in 30 species)
specific family

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Descriptions

Description (AnnoMine)
Histidine--tRNA ligase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameevm_27.TU.AmTr_v1.0_scaffold00072.135
idevm_27.model.AmTr_v1.0_scaffold00072.135

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006427IEAInterProhistidyl-tRNA aminoacylation
GO:0006418IEAInterProtRNA aminoacylation for protein translation

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005524IEAInterProATP binding
GO:0004821IEAInterProhistidine-tRNA ligase activity
GO:0004812IEAInterProaminoacyl-tRNA ligase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737IEAInterProcytoplasm
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT3G46100
GO:0005739ISOPLAZA Integrative OrthologymitochondrionAT3G46100

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR004154Anticodon-binding
IPR015807Histidine-tRNA ligase
IPR004516Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit
IPR006195Aminoacyl-tRNA synthetase, class II

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.