Gene: ATR_00066G00560 (Amborella trichopoda)

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Gene Identifier
ATR_00066G00560
Transcript Identifier
ATR_00066G00560.1
Gene Type
Coding gene
Location
scaffold00066 : 856080-869199 : positive

Family

Gene family
HOM03D000170
(605 genes in 31 species)
specific family
Subfamily
ORTHO03D000003
(455 genes in 30 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Linoleate 9S-lipoxygenase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameevm_27.TU.AmTr_v1.0_scaffold00066.56
idevm_27.model.AmTr_v1.0_scaffold00066.56

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0055114IEAInterProoxidation-reduction process
GO:0051707ISOPLAZA Integrative Orthologyresponse to other organismOS08G39840 OS03G52860 AT3G45140
GO:0009611ISOPLAZA Integrative Orthologyresponse to woundingOS08G39840 OS03G52860 AT3G45140 AT1G72520 AT1G55020 AT1G17420
GO:0009414ISOPLAZA Integrative Orthologyresponse to water deprivationAT3G45140
GO:0009695ISOPLAZA Integrative Orthologyjasmonic acid biosynthetic processAT3G45140 AT1G72520 AT1G67560 AT1G55020 AT1G17420
GO:0034440ISOPLAZA Integrative Orthologylipid oxidationAT3G45140 AT3G22400 AT1G72520 AT1G67560 AT1G55020 AT1G17420
GO:0009620ISOPLAZA Integrative Orthologyresponse to fungusAT3G45140 AT1G17420
GO:0009617ISOPLAZA Integrative Orthologyresponse to bacteriumAT3G45140 AT1G72520
GO:0009753ISOPLAZA Integrative Orthologyresponse to jasmonic acidAT3G45140 AT1G55020 AT1G17420
GO:0080027ISOPLAZA Integrative Orthologyresponse to herbivoreAT3G45140
GO:1900366ISOPLAZA Integrative Orthologynegative regulation of defense response to insectAT3G22400
GO:0010311ISOPLAZA Integrative Orthologylateral root formationAT3G22400 AT1G55020
GO:0048364ISOPLAZA Integrative Orthologyroot developmentAT3G22400 AT1G55020
GO:0040007ISOPLAZA Integrative OrthologygrowthAT1G72520 AT1G55020 AT1G17420
GO:0006952ISOPLAZA Integrative Orthologydefense responseAT1G72520 AT1G55020 AT1G17420
GO:0048653ISOPLAZA Integrative Orthologyanther developmentAT1G72520 AT1G17420
GO:0080086ISOPLAZA Integrative Orthologystamen filament developmentAT1G72520 AT1G17420
GO:0009901ISOPLAZA Integrative Orthologyanther dehiscenceAT1G72520 AT1G17420
GO:0009555ISOPLAZA Integrative Orthologypollen developmentAT1G72520 AT1G17420
GO:0010193ISOPLAZA Integrative Orthologyresponse to ozoneAT1G72520
GO:0030397ISOPLAZA Integrative Orthologymembrane disassemblyAT1G55020
GO:0009816ISOPLAZA Integrative Orthologydefense response to bacterium, incompatible interactionAT1G55020
GO:0009737ISOPLAZA Integrative Orthologyresponse to abscisic acidAT1G55020
GO:0009644ISOPLAZA Integrative Orthologyresponse to high light intensityAT1G17420
GO:0044699IEAPLAZA Homologysingle-organism processHOM03D000170
GO:0044710IEAPLAZA Homologysingle-organism metabolic processHOM03D000170

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0005506IEAInterProiron ion binding
GO:0016165IEAInterProlinoleate 13S-lipoxygenase activity
GO:0016702IEAInterProoxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0046872IEAInterPrometal ion binding
GO:0016166ISOPLAZA Integrative Orthologyphytoene dehydrogenase activityOS08G39840
GO:1990136ISOPLAZA Integrative Orthologylinoleate 9S-lipoxygenase activityAT3G22400 AT1G55020
GO:0043169IEAPLAZA Homologycation bindingHOM03D000170
GO:0043167IEAPLAZA Homologyion bindingHOM03D000170
GO:0046914IEAPLAZA Homologytransition metal ion bindingHOM03D000170
GO:0051213IEAPLAZA Homologydioxygenase activityHOM03D000170
GO:0016491IEAPLAZA Homologyoxidoreductase activityHOM03D000170
GO:0016701IEAPLAZA Homologyoxidoreductase activity, acting on single donors with incorporation of molecular oxygenHOM03D000170

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737ISOPLAZA Integrative OrthologycytoplasmOS03G52860 AT3G45140
GO:0009570ISOPLAZA Integrative Orthologychloroplast stromaAT3G45140
GO:0009535ISOPLAZA Integrative Orthologychloroplast thylakoid membraneAT3G45140
GO:0009941ISOPLAZA Integrative Orthologychloroplast envelopeAT3G45140
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT3G45140 AT3G22400 AT1G67560
GO:0009536ISOPLAZA Integrative OrthologyplastidAT3G22400 AT1G55020
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT1G67560

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013819Lipoxygenase, C-terminal
IPR001024PLAT/LH2 domain
IPR020833Lipoxygenase, iron binding site
IPR001246Lipoxygenase, plant
IPR027433Lipoxygenase, domain 3
IPR008976Lipase/lipooxygenase, PLAT/LH2
IPR020834Lipoxygenase, conserved site
IPR000907Lipoxygenase

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.