Gene: ATR_00064G00830 (Amborella trichopoda)

Overview top

Gene Identifier
ATR_00064G00830
Transcript Identifier
ATR_00064G00830.1
Gene Type
Coding gene
Location
scaffold00064 : 3336368-3338202 : negative

Family

Gene family
HOM03D001767
(94 genes in 31 species)
specific family
Duplication type
Tandem duplicate

Loading...please wait

Descriptions

Description (AnnoMine)
DNA ligase 1
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameevm_27.TU.AmTr_v1.0_scaffold00064.84
idevm_27.model.AmTr_v1.0_scaffold00064.84

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006281IEAInterProDNA repair
GO:0051103IEAInterProDNA ligation involved in DNA repair
GO:0006310IEAInterProDNA recombination
GO:0006260IEAPLAZA HomologyDNA replicationHOM03D001767

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003909IEAInterProDNA ligase activity
GO:0003910IEAInterProDNA ligase (ATP) activity
GO:0005524IEAInterProATP binding
GO:0003677IEAInterProDNA binding
GO:0016886IEAPLAZA Homologyligase activity, forming phosphoric ester bondsHOM03D001767

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR012310DNA ligase, ATP-dependent, central
IPR012308DNA ligase, ATP-dependent, N-terminal
IPR016059DNA ligase, ATP-dependent, conserved site

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.