Gene: ATR_00063G00120 (Amborella trichopoda)

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Gene Identifier
ATR_00063G00120
Transcript Identifier
ATR_00063G00120.1
Gene Type
Coding gene
Location
scaffold00063 : 1006587-1030938 : negative

Family

Gene family
HOM03D004901
(41 genes in 30 species)
specific family
Subfamily
ORTHO03D008367
(30 genes in 29 species)
specific family
Duplication type
Tandem duplicate

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Descriptions

Description (AnnoMine)
F-box protein At3g54460
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameevm_27.TU.AmTr_v1.0_scaffold00063.12
idevm_27.model.AmTr_v1.0_scaffold00063.12

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Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0008270IEAInterProzinc ion binding
GO:0005524IEAInterProATP binding
GO:0003677IEAInterProDNA binding
GO:0004386IEAPLAZA Homologyhelicase activityHOM03D004901

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009506ISOPLAZA Integrative OrthologyplasmodesmaAT3G54460

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR014001Helicase, superfamily 1/2, ATP-binding domain
IPR011124Zinc finger, CW-type
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR001810F-box domain
IPR000330SNF2-related
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR017907Zinc finger, RING-type, conserved site

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.