Gene: ATR_00057G01290 (Amborella trichopoda)

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Gene Identifier
ATR_00057G01290
Transcript Identifier
ATR_00057G01290.1
Gene Type
Coding gene
Location
scaffold00057 : 2127031-2129735 : negative

Family

Gene family
HOM03D001176
(130 genes in 30 species)
specific family
Subfamily
ORTHO03D004617
(35 genes in 28 species)
specific family

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Descriptions

Description (AnnoMine)
Superoxide dismutase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameevm_27.TU.AmTr_v1.0_scaffold00057.130
idevm_27.model.AmTr_v1.0_scaffold00057.130

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006801IEAInterProsuperoxide metabolic process
GO:0055114IEAInterProoxidation-reduction process
GO:0072593IEAPLAZA Homologyreactive oxygen species metabolic processHOM03D001176
GO:0006979ISOPLAZA Integrative Orthologyresponse to oxidative stressAT1G08830
GO:0046688ISOPLAZA Integrative Orthologyresponse to copper ionAT1G08830
GO:0010039ISOPLAZA Integrative Orthologyresponse to iron ionAT1G08830
GO:0034599ISOPLAZA Integrative Orthologycellular response to oxidative stressAT1G08830
GO:0035195ISOPLAZA Integrative Orthologygene silencing by miRNAAT1G08830
GO:0071472ISOPLAZA Integrative Orthologycellular response to salt stressAT1G08830
GO:0071329ISOPLAZA Integrative Orthologycellular response to sucrose stimulusAT1G08830
GO:0009651ISOPLAZA Integrative Orthologyresponse to salt stressAT1G08830
GO:0010193ISOPLAZA Integrative Orthologyresponse to ozoneAT1G08830
GO:0042742ISOPLAZA Integrative Orthologydefense response to bacteriumAT1G08830
GO:0071280ISOPLAZA Integrative Orthologycellular response to copper ionAT1G08830
GO:0019430ISOPLAZA Integrative Orthologyremoval of superoxide radicalsAT1G08830
GO:0071457ISOPLAZA Integrative Orthologycellular response to ozoneAT1G08830
GO:0071484ISOPLAZA Integrative Orthologycellular response to light intensityAT1G08830
GO:0071493ISOPLAZA Integrative Orthologycellular response to UV-BAT1G08830

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0046872IEAInterPrometal ion binding
GO:0004784IEAInterProsuperoxide dismutase activity
GO:0016721IEAPLAZA Homologyoxidoreductase activity, acting on superoxide radicals as acceptorHOM03D001176
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT1G08830

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005829ISOPLAZA Integrative OrthologycytosolAT1G08830
GO:0005634ISOPLAZA Integrative OrthologynucleusAT1G08830

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR018152Superoxide dismutase, copper/zinc, binding site
IPR001424Superoxide dismutase, copper/zinc binding domain
IPR024134Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.