Gene: ATR_00048G00680 (Amborella trichopoda)

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Gene Identifier
ATR_00048G00680
Transcript Identifier
ATR_00048G00680.1
Gene Type
Coding gene
Location
scaffold00048 : 1687697-1692801 : negative

Family

Gene family
HOM03D000096
(1015 genes in 31 species)
specific family
Subfamily
ORTHO03D076272
(2 genes in 2 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Probable transcription factor KAN2
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameevm_27.TU.AmTr_v1.0_scaffold00048.68
idevm_27.model.AmTr_v1.0_scaffold00048.68

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Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003682IEAInterProchromatin binding
GO:0003677IEAInterProDNA binding
GO:0005488IEAPLAZA HomologybindingHOM03D000096
GO:1901363IEAPLAZA Homologyheterocyclic compound bindingHOM03D000096
GO:0097159IEAPLAZA Homologyorganic cyclic compound bindingHOM03D000096
GO:0003676IEAPLAZA Homologynucleic acid bindingHOM03D000096

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001005SANT/Myb domain
IPR006447Myb domain, plants
IPR009057Homeodomain-like
IPR017930Myb domain

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.