Gene: ATR_00046G00350 (Amborella trichopoda)

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Gene Identifier
ATR_00046G00350
Transcript Identifier
ATR_00046G00350.1
Gene Type
Coding gene
Location
scaffold00046 : 896247-908112 : positive

Family

Gene family
HOM03D001254
(123 genes in 31 species)
specific family

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Descriptions

Description (AnnoMine)
Uncharacterized RING finger protein EEED8.16
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameevm_27.TU.AmTr_v1.0_scaffold00046.35
idevm_27.model.AmTr_v1.0_scaffold00046.35

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010029ISOPLAZA Integrative Orthologyregulation of seed germinationAT2G42160

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0008270IEAInterProzinc ion binding
GO:0046982ISOPLAZA Integrative Orthologyprotein heterodimerization activityAT2G42160
GO:0004842ISOPLAZA Integrative Orthologyubiquitin-protein ligase activityAT2G42160

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0000151ISOPLAZA Integrative Orthologyubiquitin ligase complexAT2G42160

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001607Zinc finger, UBP-type
IPR001841Zinc finger, RING-type
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR011422BRCA1-associated 2

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.