Gene: ATR_00036G01050 (Amborella trichopoda)

Overview top

Gene Identifier
ATR_00036G01050
Transcript Identifier
ATR_00036G01050.1
Gene Type
Coding gene
Location
scaffold00036 : 3511317-3562985 : negative

Family

Gene family
HOM03D004261
(45 genes in 30 species)
specific family
Subfamily
ORTHO03D005209
(34 genes in 27 species)
specific family

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Descriptions

Description (AnnoMine)
Probable phenylalanine--tRNA ligase beta subunit
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameevm_27.TU.AmTr_v1.0_scaffold00036.108
idevm_27.model.AmTr_v1.0_scaffold00036.108

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006432IEAInterProphenylalanyl-tRNA aminoacylation
GO:0043039IEAInterProtRNA aminoacylation

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000049IEAInterProtRNA binding
GO:0000287IEAInterPromagnesium ion binding
GO:0000166IEAInterPronucleotide binding
GO:0003723IEAInterProRNA binding
GO:0004826IEAInterProphenylalanine-tRNA ligase activity
GO:0005524IEAInterProATP binding
GO:0004812IEAInterProaminoacyl-tRNA ligase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737IEAInterProcytoplasm
GO:0005829ISOPLAZA Integrative OrthologycytosolAT1G72550

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR005146B3/B4 tRNA-binding domain
IPR002319Phenylalanyl-tRNA synthetase
IPR005147tRNA synthetase, B5-domain
IPR004531Phenylalanyl-tRNA synthetase, class IIc, beta subunit, archae/euk cytosolic
IPR009061DNA binding domain, putative

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.