Gene: ATR_00034G01120 (Amborella trichopoda)

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Gene Identifier
ATR_00034G01120
Transcript Identifier
ATR_00034G01120.1
Gene Type
Coding gene
Location
scaffold00034 : 5122468-5127712 : negative

Family

Gene family
HOM03D002318
(76 genes in 28 species)
specific family
Subfamily
ORTHO03D003609
(37 genes in 27 species)
specific family

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Descriptions

Description (AnnoMine)
Chalcone--flavonone isomerase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameevm_27.TU.AmTr_v1.0_scaffold00034.116
idevm_27.model.AmTr_v1.0_scaffold00034.116

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009813IEAInterProflavonoid biosynthetic process
GO:0009733ISOPLAZA Integrative Orthologyresponse to auxinAT3G55120
GO:0080167ISOPLAZA Integrative Orthologyresponse to karrikinAT3G55120
GO:0010224ISOPLAZA Integrative Orthologyresponse to UV-BAT3G55120
GO:0009411ISOPLAZA Integrative Orthologyresponse to UVAT3G55120

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016872IEAInterProintramolecular lyase activity
GO:0045430IEAInterProchalcone isomerase activity
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT3G55120

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0048046ISOPLAZA Integrative OrthologyapoplastAT3G55120
GO:0009505ISOPLAZA Integrative Orthologyplant-type cell wallAT3G55120
GO:0005634ISOPLAZA Integrative OrthologynucleusAT3G55120
GO:0042406ISOPLAZA Integrative Orthologyextrinsic to endoplasmic reticulum membraneAT3G55120
GO:0009705ISOPLAZA Integrative Orthologyplant-type vacuole membraneAT3G55120
GO:0005783ISOPLAZA Integrative Orthologyendoplasmic reticulumAT3G55120

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR016089Chalcone isomerase, orthogonal bundle domain
IPR016087Chalcone isomerase
IPR016088Chalcone isomerase, 3-layer sandwich

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.