Gene: ATR_00033G00050 (Amborella trichopoda)
Overview 
- Gene Identifier
- ATR_00033G00050
- Transcript Identifier
- ATR_00033G00050.1
- Gene Type
- Coding gene
- Location
- scaffold00033 : 84008-85177 : positive
Family
- Gene family
- Subfamily
Descriptions
- Description (AnnoMine)
-
RMD5 homolog A
Description of best ortholog(s):

Identifiers
Identifier | Name |
---|---|
GeneName | evm_27.TU.AmTr_v1.0_scaffold00033.5 |
id | evm_27.model.AmTr_v1.0_scaffold00033.5 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Molecular Function
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0005515 | IEA | InterPro | protein binding | |
GO:0008270 | IEA | InterPro | zinc ion binding |
Color Legend
Experimental Evidence |
Electronic Evidence |
Computational Reviewed Evidence |
InterPro | Description |
---|---|
IPR013083 | Zinc finger, RING/FYVE/PHD-type |
IPR001841 | Zinc finger, RING-type |
IPR027711 | Rmd5 |
IPR006595 | CTLH, C-terminal LisH motif |
IPR024964 | CTLH/CRA C-terminal to LisH motif domain |
IPR006594 | LisH dimerisation motif |
IPR027370 | RING-type zinc-finger, LisH dimerisation motif |
IPR013144 | CRA domain |
No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.