Gene: ATR_00029G04150 (Amborella trichopoda)

Overview top

Gene Identifier
ATR_00029G04150
Transcript Identifier
ATR_00029G04150.1
Gene Type
Coding gene
Location
scaffold00029 : 5651669-5663172 : positive

Family

Gene family
HOM03D002360
(75 genes in 31 species)
specific family
Subfamily
ORTHO03D001886
(45 genes in 26 species)
specific family

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Descriptions

Description (AnnoMine)
Aspartate--tRNA ligase, cytoplasmic
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameevm_27.TU.AmTr_v1.0_scaffold00029.416
idevm_27.model.AmTr_v1.0_scaffold00029.416

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006422IEAInterProaspartyl-tRNA aminoacylation
GO:0006418IEAInterProtRNA aminoacylation for protein translation
GO:0046686ISOPLAZA Integrative Orthologyresponse to cadmium ionAT4G26870 AT4G31180

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000166IEAInterPronucleotide binding
GO:0004815IEAInterProaspartate-tRNA ligase activity
GO:0003676IEAInterPronucleic acid binding
GO:0005524IEAInterProATP binding
GO:0004812IEAInterProaminoacyl-tRNA ligase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737IEAInterProcytoplasm
GO:0005829ISOPLAZA Integrative OrthologycytosolAT4G26870 AT4G31180
GO:0009506ISOPLAZA Integrative OrthologyplasmodesmaAT4G26870

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR004523Aspartyl-tRNA synthetases
IPR018150Aminoacyl-tRNA synthetase, class II (D/K/N)-like
IPR002312Aspartyl/Asparaginyl-tRNA synthetase, class IIb
IPR004364Aminoacyl-tRNA synthetase, class II (D/K/N)
IPR012340Nucleic acid-binding, OB-fold
IPR006195Aminoacyl-tRNA synthetase, class II
IPR004365OB-fold nucleic acid binding domain, AA-tRNA synthetase-type

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.