Gene: ATR_00029G02450 (Amborella trichopoda)

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Gene Identifier
ATR_00029G02450
Transcript Identifier
ATR_00029G02450.1
Gene Type
Coding gene
Location
scaffold00029 : 3132856-3143197 : negative

Family

Gene family
HOM03D000115
(820 genes in 31 species)
specific family
Subfamily
ORTHO03D006398
(32 genes in 27 species)
specific family

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Descriptions

Description (AnnoMine)
Trichome differentiation protein GL1
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameevm_27.TU.AmTr_v1.0_scaffold00029.245
idevm_27.model.AmTr_v1.0_scaffold00029.245

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009751ISOPLAZA Integrative Orthologyresponse to salicylic acidAT3G09230 AT3G55730
GO:0006355ISOPLAZA Integrative Orthologyregulation of transcription, DNA-dependentAT3G55730
GO:0009651ISOPLAZA Integrative Orthologyresponse to salt stressAT3G55730
GO:0009723ISOPLAZA Integrative Orthologyresponse to ethyleneAT3G55730
GO:0009733ISOPLAZA Integrative Orthologyresponse to auxinAT3G55730
GO:0009737ISOPLAZA Integrative Orthologyresponse to abscisic acidAT3G55730
GO:0009739ISOPLAZA Integrative Orthologyresponse to gibberellin stimulusAT3G55730
GO:0009753ISOPLAZA Integrative Orthologyresponse to jasmonic acidAT3G55730

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003682IEAInterProchromatin binding
GO:0003677IEAInterProDNA binding
GO:0005488IEAPLAZA HomologybindingHOM03D000115
GO:1901363IEAPLAZA Homologyheterocyclic compound bindingHOM03D000115
GO:0097159IEAPLAZA Homologyorganic cyclic compound bindingHOM03D000115
GO:0003676IEAPLAZA Homologynucleic acid bindingHOM03D000115

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISOPLAZA Integrative OrthologynucleusAT3G55730
GO:0005737ISOPLAZA Integrative OrthologycytoplasmAT3G55730

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001005SANT/Myb domain
IPR017930Myb domain
IPR009057Homeodomain-like

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.