Gene: ATR_00029G01860 (Amborella trichopoda)

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Gene Identifier
ATR_00029G01860
Transcript Identifier
ATR_00029G01860.1
Gene Type
Coding gene
Location
scaffold00029 : 2382429-2388340 : positive

Family

Gene family
HOM03D002289
(77 genes in 31 species)
specific family
Subfamily
ORTHO03D003355
(38 genes in 30 species)
specific family

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Descriptions

Description (AnnoMine)
Probable dimethyladenosine transferase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameevm_27.TU.AmTr_v1.0_scaffold00029.186
idevm_27.model.AmTr_v1.0_scaffold00029.186

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006364IEAInterProrRNA processing
GO:0000154IEAInterProrRNA modification
GO:0001708ISOPLAZA Integrative Orthologycell fate specificationAT2G47420
GO:0051301ISOPLAZA Integrative Orthologycell divisionAT2G47420

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008649IEAInterProrRNA methyltransferase activity
GO:0016433IEAInterProrRNA (adenine) methyltransferase activity
GO:0000179IEAInterProrRNA (adenine-N6,N6-)-dimethyltransferase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISOPLAZA Integrative OrthologynucleusAT2G47420
GO:0005730ISOPLAZA Integrative OrthologynucleolusAT2G47420

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011530Ribosomal RNA adenine dimethylase
IPR020596Ribosomal RNA adenine methylase transferase, conserved site
IPR001737Ribosomal RNA adenine methylase transferase
IPR020598Ribosomal RNA adenine methylase transferase, N-terminal
IPR02581418S rRNA dimethylase DIM1

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.