Gene: ATR_00028G00830 (Amborella trichopoda)

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Gene Identifier
ATR_00028G00830
Transcript Identifier
ATR_00028G00830.1
Gene Type
Coding gene
Location
scaffold00028 : 3450183-3463602 : positive

Family

Gene family
HOM03D000402
(311 genes in 31 species)
specific family
Subfamily
ORTHO03D000736
(68 genes in 30 species)
specific family

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Descriptions

Description (AnnoMine)
Osmosensing histidine protein kinase SLN1
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameevm_27.TU.AmTr_v1.0_scaffold00028.85
idevm_27.model.AmTr_v1.0_scaffold00028.85

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0016310IEAInterProphosphorylation
GO:0007165IEAInterProsignal transduction
GO:0006355IEAInterProregulation of transcription, DNA-dependent
GO:0000160IEAInterProphosphorelay signal transduction system
GO:0071215ISOPLAZA Integrative Orthologycellular response to abscisic acid stimulusAT5G35750 AT1G27320
GO:0070417ISOPLAZA Integrative Orthologycellular response to coldAT5G35750 AT1G27320
GO:0048509ISOPLAZA Integrative Orthologyregulation of meristem developmentAT5G35750 AT1G27320
GO:0080117ISOPLAZA Integrative Orthologysecondary growthAT5G35750 AT1G27320
GO:0009909ISOPLAZA Integrative Orthologyregulation of flower developmentAT5G35750 AT1G27320
GO:0010087ISOPLAZA Integrative Orthologyphloem or xylem histogenesisAT5G35750 AT1G27320
GO:0009737ISOPLAZA Integrative Orthologyresponse to abscisic acidAT5G35750
GO:0034757ISOPLAZA Integrative Orthologynegative regulation of iron ion transportAT5G35750 AT1G27320
GO:0009651ISOPLAZA Integrative Orthologyresponse to salt stressAT5G35750 AT1G27320
GO:0009414ISOPLAZA Integrative Orthologyresponse to water deprivationAT5G35750 AT1G27320
GO:0006970ISOPLAZA Integrative Orthologyresponse to osmotic stressAT5G35750 AT1G27320
GO:0009636ISOPLAZA Integrative Orthologyresponse to toxic substanceAT5G35750
GO:0010150ISOPLAZA Integrative Orthologyleaf senescenceAT5G35750 AT1G27320
GO:0048831ISOPLAZA Integrative Orthologyregulation of shoot system developmentAT5G35750 AT1G27320
GO:0010271ISOPLAZA Integrative Orthologyregulation of chlorophyll catabolic processAT5G35750 AT1G27320
GO:0010029ISOPLAZA Integrative Orthologyregulation of seed germinationAT5G35750 AT1G27320
GO:0009736ISOPLAZA Integrative Orthologycytokinin-activated signaling pathwayAT5G35750 AT1G27320
GO:0042742ISOPLAZA Integrative Orthologydefense response to bacteriumAT1G27320
GO:0009409ISOPLAZA Integrative Orthologyresponse to coldAT1G27320
GO:0071329ISOPLAZA Integrative Orthologycellular response to sucrose stimulusAT1G27320
GO:0016036ISOPLAZA Integrative Orthologycellular response to phosphate starvationAT1G27320
GO:0051716IEAPLAZA Homologycellular response to stimulusHOM03D000402
GO:0051252IEAPLAZA Homologyregulation of RNA metabolic processHOM03D000402
GO:0009889IEAPLAZA Homologyregulation of biosynthetic processHOM03D000402
GO:0023052IEAPLAZA HomologysignalingHOM03D000402
GO:0010556IEAPLAZA Homologyregulation of macromolecule biosynthetic processHOM03D000402
GO:0007154IEAPLAZA Homologycell communicationHOM03D000402
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03D000402
GO:2000112IEAPLAZA Homologyregulation of cellular macromolecule biosynthetic processHOM03D000402
GO:0031326IEAPLAZA Homologyregulation of cellular biosynthetic processHOM03D000402
GO:0044700IEAPLAZA Homologysingle organism signalingHOM03D000402
GO:0050896IEAPLAZA Homologyresponse to stimulusHOM03D000402

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000156IEAInterProphosphorelay response regulator activity
GO:0004871IEAInterProsignal transducer activity
GO:0000155IEAInterProphosphorelay sensor kinase activity
GO:0005524IEAInterProATP binding
GO:0016772IEAInterProtransferase activity, transferring phosphorus-containing groups
GO:0019900ISOPLAZA Integrative Orthologykinase bindingAT5G35750
GO:0005034ISOPLAZA Integrative Orthologyosmosensor activityAT5G35750 AT1G27320
GO:0043424ISOPLAZA Integrative Orthologyprotein histidine kinase bindingAT5G35750 AT1G27320
GO:0042802ISOPLAZA Integrative Orthologyidentical protein bindingAT5G35750
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT5G35750 AT1G27320
GO:0004673ISOPLAZA Integrative Orthologyprotein histidine kinase activityAT5G35750 AT1G27320
GO:0004721ISOPLAZA Integrative Orthologyphosphoprotein phosphatase activityAT5G35750 AT1G27320
GO:0009884ISOPLAZA Integrative Orthologycytokinin receptor activityAT5G35750 AT1G27320
GO:0060089IEAPLAZA Homologymolecular transducer activityHOM03D000402
GO:0016775IEAPLAZA Homologyphosphotransferase activity, nitrogenous group as acceptorHOM03D000402
GO:0038023IEAPLAZA Homologysignaling receptor activityHOM03D000402
GO:0004872IEAPLAZA Homologyreceptor activityHOM03D000402

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020IEAInterPromembrane
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT1G27320

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003594Histidine kinase-like ATPase, ATP-binding domain
IPR003661Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain
IPR006189CHASE
IPR011006CheY-like superfamily
IPR004358Signal transduction histidine kinase-related protein, C-terminal
IPR001789Signal transduction response regulator, receiver domain
IPR009082Signal transduction histidine kinase, homodimeric domain
IPR005467Signal transduction histidine kinase, core

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.