Gene: ATR_00026G00420 (Amborella trichopoda)

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Gene Identifier
ATR_00026G00420
Transcript Identifier
ATR_00026G00420.1
Gene Type
Coding gene
Location
scaffold00026 : 1313798-1317193 : negative

Family

Gene family
HOM03D000054
(1416 genes in 31 species)
specific family
Subfamily
ORTHO03D000001
(530 genes in 29 species)
specific family

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Descriptions

Description (AnnoMine)
Hexose carrier protein HEX6
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameevm_27.TU.AmTr_v1.0_scaffold00026.43
idevm_27.model.AmTr_v1.0_scaffold00026.43

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006810IEAInterProtransport
GO:0055085IEAInterProtransmembrane transport
GO:0008643ISOPLAZA Integrative Orthologycarbohydrate transportSL07G006970
GO:0044765IEAPLAZA Homologysingle-organism transportHOM03D000054
GO:0009987IEAPLAZA Homologycellular processHOM03D000054
GO:0044699IEAPLAZA Homologysingle-organism processHOM03D000054
GO:0044763IEAPLAZA Homologysingle-organism cellular processHOM03D000054
GO:0051234IEAPLAZA Homologyestablishment of localizationHOM03D000054
GO:0051179IEAPLAZA HomologylocalizationHOM03D000054

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005215IEAInterProtransporter activity
GO:0022891IEAInterProsubstrate-specific transmembrane transporter activity
GO:0022857IEAInterProtransmembrane transporter activity
GO:0015144ISOPLAZA Integrative Orthologycarbohydrate transmembrane transporter activitySL07G006970
GO:0022892IEAPLAZA Homologysubstrate-specific transporter activityHOM03D000054

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020IEAInterPromembrane
GO:0016021IEAInterProintegral to membrane
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT4G02050
GO:0031224IEAPLAZA Homologyintrinsic to membraneHOM03D000054
GO:0044425IEAPLAZA Homologymembrane partHOM03D000054

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003663Sugar/inositol transporter
IPR005828General substrate transporter
IPR005829Sugar transporter, conserved site
IPR016196Major facilitator superfamily domain, general substrate transporter
IPR020846Major facilitator superfamily domain

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.