Gene: ATR_00022G00160 (Amborella trichopoda)

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Gene Identifier
ATR_00022G00160
Transcript Identifier
ATR_00022G00160.1
Gene Type
Coding gene
Location
scaffold00022 : 230737-238528 : positive

Family

Gene family
HOM03D001135
(135 genes in 31 species)
specific family

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Descriptions

Description (AnnoMine)
polymerases II and IV subunit 5A
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameevm_27.TU.AmTr_v1.0_scaffold00022.16
idevm_27.model.AmTr_v1.0_scaffold00022.16

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006351IEAInterProtranscription, DNA-templated

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003899IEAInterProDNA-directed RNA polymerase activity
GO:0003677IEAInterProDNA binding
GO:0034062IEAPLAZA HomologyRNA polymerase activityHOM03D001135

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEAInterPronucleus
GO:0005665ISOPLAZA Tree-based OrthologyDNA-directed RNA polymerase II, core complexAT3G22320
GO:0000418ISOPLAZA Tree-based OrthologyDNA-directed RNA polymerase IV complexAT3G22320

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR005571RNA polymerase, Rpb5, N-terminal
IPR020608RNA polymerase, subunit H/Rpb5, conserved site
IPR000783RNA polymerase, subunit H/Rpb5 C-terminal

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.