Gene: ATR_00019G03830 (Amborella trichopoda)

Overview top

Gene Identifier
ATR_00019G03830
Transcript Identifier
ATR_00019G03830.1
Gene Type
Coding gene
Location
scaffold00019 : 6033975-6037927 : positive

Family

Gene family
HOM03D005890
(37 genes in 31 species)
specific family

Loading...please wait

Descriptions

Description (AnnoMine)
transcription factor IIH subunit 2
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameevm_27.TU.AmTr_v1.0_scaffold00019.388
idevm_27.model.AmTr_v1.0_scaffold00019.388

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006281IEAInterProDNA repair
GO:0006289IEAInterPronucleotide-excision repair
GO:0006351IEAInterProtranscription, DNA-templated
GO:0006357ISOPLAZA Integrative Orthologyregulation of transcription from RNA polymerase II promoterAT1G05055

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008270IEAInterProzinc ion binding
GO:0046872IEAInterPrometal ion binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0000439IEAInterProcore TFIIH complex
GO:0005675ISOPLAZA Integrative Orthologyholo TFIIH complexAT1G05055
GO:0000441IEAPLAZA HomologySSL2-core TFIIH complexHOM03D005890
GO:0032806IEAPLAZA Homologycarboxy-terminal domain protein kinase complexHOM03D005890

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR002035von Willebrand factor, type A
IPR012170TFIIH subunit Ssl1/p44
IPR004595TFIIH C1-like domain
IPR007198Ssl1-like
IPR007087Zinc finger, C2H2

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.