Gene: ATR_00017G02780 (Amborella trichopoda)

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Gene Identifier
ATR_00017G02780
Transcript Identifier
ATR_00017G02780.1
Gene Type
Coding gene
Location
scaffold00017 : 6989859-7005236 : negative

Family

Gene family
HOM03D000941
(156 genes in 31 species)
specific family
Subfamily
ORTHO03D003715
(37 genes in 30 species)
specific family

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Descriptions

Description (AnnoMine)
PAP-specific phosphatase HAL2-like
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameevm_27.TU.AmTr_v1.0_scaffold00017.281
idevm_27.model.AmTr_v1.0_scaffold00017.281

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006790IEAInterProsulfur compound metabolic process
GO:0046854IEAInterProphosphatidylinositol phosphorylation
GO:0048015ISOPLAZA Integrative Orthologyphosphatidylinositol-mediated signalingAT5G63980
GO:0043157ISOPLAZA Integrative Orthologyresponse to cation stressAT5G63980
GO:0080141ISOPLAZA Integrative Orthologyregulation of jasmonic acid biosynthetic processAT5G63980
GO:0051512ISOPLAZA Integrative Orthologypositive regulation of unidimensional cell growthAT5G63980
GO:0048573ISOPLAZA Integrative Orthologyphotoperiodism, floweringAT5G63980
GO:0009416ISOPLAZA Integrative Orthologyresponse to light stimulusAT5G63980
GO:0006401ISOPLAZA Integrative OrthologyRNA catabolic processAT5G63980
GO:0010587ISOPLAZA Integrative OrthologymiRNA catabolic processAT5G63980
GO:0050826ISOPLAZA Integrative Orthologyresponse to freezingAT5G63980
GO:0009651ISOPLAZA Integrative Orthologyresponse to salt stressAT5G63980
GO:0009738ISOPLAZA Integrative Orthologyabscisic acid-activated signaling pathwayAT5G63980
GO:0009414ISOPLAZA Integrative Orthologyresponse to water deprivationAT5G63980
GO:0045892ISOPLAZA Integrative Orthologynegative regulation of transcription, DNA-dependentAT5G63980
GO:0009409ISOPLAZA Integrative Orthologyresponse to coldAT5G63980
GO:0009968ISOPLAZA Integrative Orthologynegative regulation of signal transductionAT5G63980
GO:0006650IEAPLAZA Homologyglycerophospholipid metabolic processHOM03D000941
GO:0046486IEAPLAZA Homologyglycerolipid metabolic processHOM03D000941
GO:0030258IEAPLAZA Homologylipid modificationHOM03D000941
GO:0046488IEAPLAZA Homologyphosphatidylinositol metabolic processHOM03D000941
GO:0046834IEAPLAZA Homologylipid phosphorylationHOM03D000941
GO:0006644IEAPLAZA Homologyphospholipid metabolic processHOM03D000941

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008441IEAInterPro3'(2'),5'-bisphosphate nucleotidase activity
GO:0016312ISOPLAZA Integrative Orthologyinositol bisphosphate phosphatase activityAT5G64000
GO:0008934ISOPLAZA Integrative Orthologyinositol monophosphate 1-phosphatase activityAT5G64000
GO:0004441ISOPLAZA Integrative Orthologyinositol-1,4-bisphosphate 1-phosphatase activityAT5G63980
GO:0008252IEAPLAZA Homologynucleotidase activityHOM03D000941

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005829ISOPLAZA Integrative OrthologycytosolAT5G63980
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT5G63980
GO:0005737ISOPLAZA Integrative OrthologycytoplasmAT5G63980
GO:0005634ISOPLAZA Integrative OrthologynucleusAT5G63980
GO:0009570ISOPLAZA Integrative Orthologychloroplast stromaAT5G63980

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000760Inositol monophosphatase
IPR020550Inositol monophosphatase, conserved site
IPR0062393(2),5 -bisphosphate nucleotidase HAL2
IPR020583Inositol monophosphatase, metal-binding site

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.