Gene: ATR_00017G00530 (Amborella trichopoda)

Overview top

Gene Identifier
ATR_00017G00530
Transcript Identifier
ATR_00017G00530.1
Gene Type
Coding gene
Location
scaffold00017 : 1794848-1810676 : negative

Family

Gene family
HOM03D004016
(47 genes in 31 species)
specific family
Subfamily
ORTHO03D002942
(39 genes in 30 species)
specific family

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Descriptions

Description (AnnoMine)
CUL4-associated factor homolog 1
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameevm_27.TU.AmTr_v1.0_scaffold00017.53
idevm_27.model.AmTr_v1.0_scaffold00017.53

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009793ISOPLAZA Integrative Orthologyembryo development ending in seed dormancyAT4G31160
GO:0009908ISOPLAZA Integrative Orthologyflower developmentAT4G31160
GO:0010154ISOPLAZA Integrative Orthologyfruit developmentAT4G31160
GO:0048366ISOPLAZA Integrative Orthologyleaf developmentAT4G31160
GO:0048367ISOPLAZA Integrative Orthologyshoot system developmentAT4G31160
GO:0048827ISOPLAZA Integrative Orthologyphyllome developmentAT4G31160

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0005488IEAInterProbinding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISOPLAZA Integrative OrthologynucleusAT4G31160
GO:0080008ISOPLAZA Integrative OrthologyCul4-RING ubiquitin ligase complexAT4G31160

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013720LisH dimerisation motif, subgroup
IPR016024Armadillo-type fold
IPR006594LisH dimerisation motif
IPR001680WD40 repeat
IPR015943WD40/YVTN repeat-like-containing domain
IPR017986WD40-repeat-containing domain

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.