Gene: ATR_00013G00340 (Amborella trichopoda)

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Gene Identifier
ATR_00013G00340
Transcript Identifier
ATR_00013G00340.1
Gene Type
Coding gene
Location
scaffold00013 : 860148-868924 : positive

Family

Gene family
HOM03D000402
(311 genes in 31 species)
specific family
Subfamily
ORTHO03D000736
(68 genes in 30 species)
specific family

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Descriptions

Description (AnnoMine)
Histidine kinase 4
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameevm_27.TU.AmTr_v1.0_scaffold00013.34
idevm_27.model.AmTr_v1.0_scaffold00013.34

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0016310IEAInterProphosphorylation
GO:0007165IEAInterProsignal transduction
GO:0006355IEAInterProregulation of transcription, DNA-dependent
GO:0000160IEAInterProphosphorelay signal transduction system
GO:0033500ISOPLAZA Integrative Orthologycarbohydrate homeostasisAT2G01830
GO:0007231ISOPLAZA Integrative Orthologyosmosensory signaling pathwayAT2G01830
GO:0048509ISOPLAZA Integrative Orthologyregulation of meristem developmentAT2G01830 AT1G27320
GO:0042742ISOPLAZA Integrative Orthologydefense response to bacteriumAT2G01830 AT1G27320
GO:0009414ISOPLAZA Integrative Orthologyresponse to water deprivationAT2G01830 AT1G27320
GO:0006468ISOPLAZA Integrative Orthologyprotein phosphorylationAT2G01830
GO:0010150ISOPLAZA Integrative Orthologyleaf senescenceAT2G01830 AT1G27320
GO:0048831ISOPLAZA Integrative Orthologyregulation of shoot system developmentAT2G01830 AT1G27320
GO:0010029ISOPLAZA Integrative Orthologyregulation of seed germinationAT2G01830 AT1G27320
GO:0071329ISOPLAZA Integrative Orthologycellular response to sucrose stimulusAT2G01830 AT1G27320
GO:0016036ISOPLAZA Integrative Orthologycellular response to phosphate starvationAT2G01830 AT1G27320
GO:0008272ISOPLAZA Integrative Orthologysulfate transportAT2G01830
GO:0009736ISOPLAZA Integrative Orthologycytokinin-activated signaling pathwayAT2G01830 AT1G27320
GO:0010086ISOPLAZA Integrative Orthologyembryonic root morphogenesisAT2G01830
GO:0071215ISOPLAZA Integrative Orthologycellular response to abscisic acid stimulusAT1G27320
GO:0070417ISOPLAZA Integrative Orthologycellular response to coldAT1G27320
GO:0009909ISOPLAZA Integrative Orthologyregulation of flower developmentAT1G27320
GO:0080117ISOPLAZA Integrative Orthologysecondary growthAT1G27320
GO:0010087ISOPLAZA Integrative Orthologyphloem or xylem histogenesisAT1G27320
GO:0009651ISOPLAZA Integrative Orthologyresponse to salt stressAT1G27320
GO:0034757ISOPLAZA Integrative Orthologynegative regulation of iron ion transportAT1G27320
GO:0009409ISOPLAZA Integrative Orthologyresponse to coldAT1G27320
GO:0006970ISOPLAZA Integrative Orthologyresponse to osmotic stressAT1G27320
GO:0010271ISOPLAZA Integrative Orthologyregulation of chlorophyll catabolic processAT1G27320
GO:0051716IEAPLAZA Homologycellular response to stimulusHOM03D000402
GO:0051252IEAPLAZA Homologyregulation of RNA metabolic processHOM03D000402
GO:0009889IEAPLAZA Homologyregulation of biosynthetic processHOM03D000402
GO:0023052IEAPLAZA HomologysignalingHOM03D000402
GO:0010556IEAPLAZA Homologyregulation of macromolecule biosynthetic processHOM03D000402
GO:0007154IEAPLAZA Homologycell communicationHOM03D000402
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03D000402
GO:2000112IEAPLAZA Homologyregulation of cellular macromolecule biosynthetic processHOM03D000402
GO:0031326IEAPLAZA Homologyregulation of cellular biosynthetic processHOM03D000402
GO:0044700IEAPLAZA Homologysingle organism signalingHOM03D000402
GO:0050896IEAPLAZA Homologyresponse to stimulusHOM03D000402

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000156IEAInterProphosphorelay response regulator activity
GO:0004871IEAInterProsignal transducer activity
GO:0000155IEAInterProphosphorelay sensor kinase activity
GO:0005524IEAInterProATP binding
GO:0016772IEAInterProtransferase activity, transferring phosphorus-containing groups
GO:0019899ISOPLAZA Integrative Orthologyenzyme bindingAT2G01830
GO:0019901ISOPLAZA Integrative Orthologyprotein kinase bindingAT2G01830
GO:0005034ISOPLAZA Integrative Orthologyosmosensor activityAT2G01830 AT1G27320
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT2G01830 AT1G27320
GO:0043424ISOPLAZA Integrative Orthologyprotein histidine kinase bindingAT2G01830 AT1G27320
GO:0004721ISOPLAZA Integrative Orthologyphosphoprotein phosphatase activityAT2G01830 AT1G27320
GO:0004673ISOPLAZA Integrative Orthologyprotein histidine kinase activityAT2G01830 AT1G27320
GO:0019955ISOPLAZA Integrative Orthologycytokine bindingAT2G01830
GO:0009884ISOPLAZA Integrative Orthologycytokinin receptor activityAT2G01830 AT1G27320
GO:0009885ISOPLAZA Integrative Orthologytransmembrane histidine kinase cytokinin receptor activityAT2G01830
GO:0060089IEAPLAZA Homologymolecular transducer activityHOM03D000402
GO:0016775IEAPLAZA Homologyphosphotransferase activity, nitrogenous group as acceptorHOM03D000402
GO:0038023IEAPLAZA Homologysignaling receptor activityHOM03D000402
GO:0004872IEAPLAZA Homologyreceptor activityHOM03D000402

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020IEAInterPromembrane
GO:0005783ISOPLAZA Integrative Orthologyendoplasmic reticulumAT2G01830
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT1G27320

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001789Signal transduction response regulator, receiver domain
IPR011006CheY-like superfamily
IPR003594Histidine kinase-like ATPase, ATP-binding domain
IPR003661Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain
IPR004358Signal transduction histidine kinase-related protein, C-terminal
IPR009082Signal transduction histidine kinase, homodimeric domain
IPR006189CHASE
IPR005467Signal transduction histidine kinase, core

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.