Gene: ATR_00009G04260 (Amborella trichopoda)

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Gene Identifier
ATR_00009G04260
Transcript Identifier
ATR_00009G04260.1
Gene Type
Coding gene
Location
scaffold00009 : 9196699-9219904 : negative

Family

Gene family
HOM03D002787
(65 genes in 30 species)
specific family
Subfamily
ORTHO03D002002
(44 genes in 30 species)
specific family

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Descriptions

Description (AnnoMine)
U4/U6 small nuclear ribonucleoprotein Prp31
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameevm_27.TU.AmTr_v1.0_scaffold00009.429
idevm_27.model.AmTr_v1.0_scaffold00009.429

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0000244IEAInterProspliceosomal tri-snRNP complex assembly
GO:0000398IEAInterPromRNA splicing, via spliceosome

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0046540IEAInterProU4/U6 x U5 tri-snRNP complex
GO:0097525IEAPLAZA Homologyspliceosomal snRNP complexHOM03D002787
GO:0097526IEAPLAZA Homologyspliceosomal tri-snRNP complexHOM03D002787

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR012976NOSIC
IPR002687Nop domain
IPR027105U4/U6 small nuclear ribonucleoprotein Prp31
IPR019175Prp31 C-terminal

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.