Gene: ATR_00009G03590 (Amborella trichopoda)

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Gene Identifier
ATR_00009G03590
Transcript Identifier
ATR_00009G03590.1
Gene Type
Coding gene
Location
scaffold00009 : 8224027-8239895 : positive

Family

Gene family
HOM03D001737
(95 genes in 31 species)
specific family
Subfamily
ORTHO03D003012
(39 genes in 29 species)
specific family

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Descriptions

Description (AnnoMine)
bromo and BTB domain-containing protein DDB_G0293800
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameevm_27.TU.AmTr_v1.0_scaffold00009.362
idevm_27.model.AmTr_v1.0_scaffold00009.362

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:1900140ISOPLAZA Integrative Orthologyregulation of seedling developmentAT5G53470
GO:0010162ISOPLAZA Integrative Orthologyseed dormancy processAT5G53470
GO:0010029ISOPLAZA Integrative Orthologyregulation of seed germinationAT5G53470
GO:0009737ISOPLAZA Integrative Orthologyresponse to abscisic acidAT5G53470
GO:0009409ISOPLAZA Integrative Orthologyresponse to coldAT5G53470
GO:0006629ISOPLAZA Integrative Orthologylipid metabolic processAT5G53470
GO:0010288ISOPLAZA Integrative Orthologyresponse to lead ionAT5G53470 AT4G27780
GO:0006869ISOPLAZA Integrative Orthologylipid transportAT5G53470 AT4G27780

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0000062IEAInterProfatty-acyl-CoA binding
GO:0008289ISOPLAZA Integrative Orthologylipid bindingAT5G53470
GO:0070300ISOPLAZA Integrative Orthologyphosphatidic acid bindingAT5G53470
GO:0032791ISOPLAZA Integrative Orthologylead ion bindingAT5G53470 AT4G27780

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009505ISOPLAZA Integrative Orthologyplant-type cell wallAT5G53470
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT5G53470 AT4G27780
GO:0009514ISOPLAZA Integrative OrthologyglyoxysomeAT4G27780
GO:0005783ISOPLAZA Integrative Orthologyendoplasmic reticulumAT4G27780

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR020683Ankyrin repeat-containing domain
IPR002110Ankyrin repeat
IPR000582Acyl-CoA-binding protein, ACBP
IPR014352FERM/acyl-CoA-binding protein, 3-helical bundle

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.