Gene: ATR_00006G02680 (Amborella trichopoda)

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Gene Identifier
ATR_00006G02680
Transcript Identifier
ATR_00006G02680.1
Gene Type
Coding gene
Location
scaffold00006 : 8442393-8449984 : positive

Family

Gene family
HOM03D006698
(33 genes in 27 species)
specific family

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Descriptions

Description (AnnoMine)
Tryptophan synthase beta chain 2
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameevm_27.TU.AmTr_v1.0_scaffold00006.271
idevm_27.model.AmTr_v1.0_scaffold00006.271

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0000162IEAInterProtryptophan biosynthetic process
GO:0006568IEAInterProtryptophan metabolic process
GO:0046219IEAPLAZA Homologyindolalkylamine biosynthetic processHOM03D006698

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004834IEAInterProtryptophan synthase activity
GO:0030170IEAInterPropyridoxal phosphate binding
GO:0052684ISOPLAZA Integrative OrthologyL-serine hydro-lyase (adding indole, L-tryptophan-forming) activityAT5G38530
GO:0042803ISOPLAZA Integrative Orthologyprotein homodimerization activityAT5G38530

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001926Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily
IPR023026Tryptophan synthase beta chain/beta chain-like
IPR006653Tryptophan synthase, beta chain, conserved site
IPR006316Tryptophan synthase, beta chain-like

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.