Gene: ATR_00001G03000 (Amborella trichopoda)

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Gene Identifier
ATR_00001G03000
Transcript Identifier
ATR_00001G03000.1
Gene Type
Coding gene
Location
scaffold00001 : 6109392-6120669 : negative

Family

Gene family
HOM03D003484
(52 genes in 31 species)
specific family
Subfamily
ORTHO03D003767
(37 genes in 31 species)
specific family
Duplication type
Tandem duplicate

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Descriptions

Description (AnnoMine)
Cytoplasmic tRNA 2-thiolation protein 1
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameevm_27.TU.AmTr_v1.0_scaffold00001.303
idevm_27.model.AmTr_v1.0_scaffold00001.303

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0080157ISOPLAZA Integrative Orthologyregulation of plant-type cell wall organization or biogenesisAT2G44270
GO:0000302ISOPLAZA Integrative Orthologyresponse to reactive oxygen speciesAT2G44270
GO:0034227IEAPLAZA HomologytRNA thio-modificationHOM03D003484

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000049IEAPLAZA HomologytRNA bindingHOM03D003484

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737IEAPLAZA HomologycytoplasmHOM03D003484

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR014729Rossmann-like alpha/beta/alpha sandwich fold
IPR011063tRNA(Ile)-lysidine/2-thiocytidine synthase

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.