Gene: ATR_00001G02300 (Amborella trichopoda)

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Gene Identifier
ATR_00001G02300
Transcript Identifier
ATR_00001G02300.1
Gene Type
Coding gene
Location
scaffold00001 : 4621435-4622146 : positive

Family

Gene family
HOM03D000582
(230 genes in 29 species)
specific family
Subfamily
ORTHO03D079620
(2 genes in 2 species)
specific family

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Descriptions

Description (AnnoMine)
SHI RELATED SEQUENCE
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameevm_27.TU.AmTr_v1.0_scaffold00001.233
idevm_27.model.AmTr_v1.0_scaffold00001.233

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009938ISOPLAZA Integrative Orthologynegative regulation of gibberellic acid mediated signaling pathwayAT5G66350
GO:0009739ISOPLAZA Integrative Orthologyresponse to gibberellin stimulusAT5G66350
GO:0009740ISOPLAZA Integrative Orthologygibberellic acid mediated signaling pathwayAT5G66350
GO:0010252ISOPLAZA Integrative Orthologyauxin homeostasisAT4G36260 AT3G51060
GO:0048480ISOPLAZA Integrative Orthologystigma developmentAT4G36260 AT3G51060
GO:0048479ISOPLAZA Integrative Orthologystyle developmentAT4G36260 AT3G51060
GO:0010051ISOPLAZA Integrative Orthologyxylem and phloem pattern formationAT4G36260 AT3G51060
GO:0045893ISOPLAZA Integrative Orthologypositive regulation of transcription, DNA-dependentAT3G51060
GO:0009299ISOPLAZA Integrative OrthologymRNA transcriptionAT1G19790
GO:0048467ISOPLAZA Integrative Orthologygynoecium developmentAT1G75520

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0046982ISOPLAZA Integrative Orthologyprotein heterodimerization activityAT5G66350 AT3G51060
GO:0003700ISOPLAZA Integrative Orthologysequence-specific DNA binding transcription factor activityAT5G66350
GO:0003677ISOPLAZA Integrative OrthologyDNA bindingAT3G51060

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISOPLAZA Integrative OrthologynucleusAT5G66350 AT3G51060 AT1G19790

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR007818Protein of unknown function DUF702
IPR006511Lateral Root Primordium type 1, C-terminal
IPR006510Zinc finger, lateral root primordium type 1

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.