Gene: ATR_00001G02200 (Amborella trichopoda)

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Gene Identifier
ATR_00001G02200
Transcript Identifier
ATR_00001G02200.1
Gene Type
Coding gene
Location
scaffold00001 : 4274405-4276315 : positive

Family

Gene family
HOM03D000235
(450 genes in 31 species)
specific family
Subfamily
ORTHO03D006077
(33 genes in 25 species)
specific family

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Descriptions

Description (AnnoMine)
Probable salt tolerance-like protein At1g75540
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameevm_27.TU.AmTr_v1.0_scaffold00001.223
idevm_27.model.AmTr_v1.0_scaffold00001.223

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009741ISOPLAZA Integrative Orthologyresponse to brassinosteroidAT4G39070
GO:0080167ISOPLAZA Integrative Orthologyresponse to karrikinAT4G39070
GO:0010200ISOPLAZA Integrative Orthologyresponse to chitinAT4G39070
GO:0006355ISOPLAZA Integrative Orthologyregulation of transcription, DNA-dependentAT4G39070 AT1G75540
GO:0009641ISOPLAZA Integrative Orthologyshade avoidanceAT1G75540

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008270IEAInterProzinc ion binding
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT1G75540
GO:0043169IEAPLAZA Homologycation bindingHOM03D000235
GO:0046914IEAPLAZA Homologytransition metal ion bindingHOM03D000235
GO:0046872IEAPLAZA Homologymetal ion bindingHOM03D000235

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005622IEAInterProintracellular
GO:0044464IEAPLAZA Homologycell partHOM03D000235
GO:0005623IEAPLAZA HomologycellHOM03D000235

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000315Zinc finger, B-box

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.